NAME_ID = RLC_Ivana_EF067844-1
CLASSIF = Retrotransposon, LTR, Copia
COMMENT = complete element
TREPACC = TREP2289
ORGANIS = Hordeum vulgare
SIZEDNA = 5083
SSOURCE = EF067844
RELDATE = 14-AUG-2006
SUBMITT = Takao Komatsuda
REFEREN = Komatsuda et al., Proc Natl Acad Sci USA. 104: 1424-1429 (2007)
ANN_TSD = 
ANN_LTR = 
PROTEIN = PTREP132
>gnl|TREP|TREP2289 Retrotransposon, LTR, Copia, "RLC_Ivana_EF067844-1"; complete element
TGTTAGCAAATAACCTAGCTCGACAGCGTCAGGTTCAGGGTAGACGCAGT
TTCAGGGTTCAGTTTCGTCAGTCCCGTAGTGTTCGTTGTTTTCTGTTAGT
TGTTGGTTCAGTCAAGCCTGAGGACGCGGCATGTGCGCTCCCGAGGCCGT
AGTTCACGGCGAGCACGCACCCCTGATCGTGGGATGGCACGATCTGGTAG
GGGGGTCGTCCTTGATCCGTTTTTCCTGTCAATCAGTGAATAAGAGGAAG
AAGAAAAGCAGCAGTTCAGTGCGCTGCACAAAATACTGTCGTCTCCCTCT
CTCGTTCTCTCATCGCCACTGACAGAAGCTCTCCCTCTCTCTCGATCGGG
GGTAGGGTAGCGACTACAATTGGCATCAGAGCCACCGTGAGGTCCGGGAC
ATGGCCGGGGACGACACCGGGAGCAAGACGCAATCGACGCCGCGCGCGAG
AATCTCCGACGGCACAGAGATGACCGTGGCGGAGAGATCATCGGCGCGGG
TGGTGCGTGACACCGGCGGCACGTCATGGCCAATGCTGACGAGGACCAAC
TACACCGACTGGGCGGTGCTCATGCAGGTCATGATGGAGGGACGGCACCT
GTGGGACGCCGTGCAAACAGGCACGGCGGAGCGGAGCGACGATCGGCTCG
CGCTCGAGGCGATTATGCGCGGGGTGCCGCCTGAGATGGCACCCTCTCTC
GCCGGCAAGGCCACGGCGAAGGAGGCGTGGGACGCGGTGAAGACCATGTG
CCCTGGAGTGGCGCGCGTCCGCGAGGCGAAACTCGCGACGATCACCAAAC
AGTACAGCGACATTCGGTTCACCGACGGCGAGACGGTGGATGACTTTGCG
ATGAGGATCACCAACATGGTGGCCCAGATGGCACAGCTCGGCGAGGAAGT
GCCGGAGAAGCGCGTGGTAAGGAAGTTCCTCTCTGTCGTCCCGAAGAGGT
ATTCCCAGATCGCGCTCTCCATTGAGACCCTGGTAGATCTTGACGCGCTC
TCGGTGGAGGAGCTCACCAGCCGACTCAAGGCCGCCGAGGAGCGGTATGA
TCTCGAGCAGGCGGAGACGGGCATTGATCGTCTCCTCATGACGATGGAGG
AGTGGAAGAAGTGCATGAAACGCACTGAAGCCGACGGATCCAGCGGCTCC
GGATCTGGTGGTGGCCGCGGAGGCGGTCGTCGCGGTCGCGGGCGCGGACG
TGGCGGAGGGCGTGGCAACAGCAGCCGCGCCGAACCCACTGACATTTGTC
GGCACTGCAAGAAGGCCGGACACTGGCGCGTGAGTGCCGCACGCGTCTCC
GCAAGGAGGCAAACCTTGTCGAGCAGGGCGGACATGCTGCGGACGGACAA
GATGATGATCCAACGCTCCTGATGGCGGTGATCGCCACGTCCCCGTCACA
GAACGCGGGGGAGCAGGTCATGCTCAACGAGGAACACGCGGAGGCAAATC
TGGGTGCGGAGGAGGCATCGTGCGACGGGCGGTGGTTCCTGGACCCCCAG
CGCCTCCAACCACATGACCGGAGACCGCGCGGCGTTCGCGGAGCTGGACA
AGGGCGTCACTGGGAGCGTCAGGTTCGGAGATGGGTCCAGCGTGGCCATC
CAGGGCCGCGGCACGGTCACGTTCACCATGCGCAGCGGAGATCATCGCGC
CCTCACCGACGTCTACTTCATCCCACGCATGAAGACCAGCATCATCAGCC
TCGGGCAGCTGGACGAACACGGCTGCACCACCAAAATGCAGGGCGGCACT
CTCACGCTCTATGACTGCCGCCAACACGAGCTAGCCCAGGTACGGCGAAA
CGGCAAGCGTCTCTATGTGGTCCGTTTGGACATCTGACACCCTGTCTATC
TGTCGGCGCGCACCGGCGATGAGGCATGGAGGTGGCACGCCAGGTTCGGC
CACCAGCACTTCGACGCTCTCCGGCGCATGGGGCGCGCGGACATGGTGCG
CGAGATGCCCCTCGTGGATCACACCGAGGAGTTGTGCGACGTGTTCTTGG
TGGGGAAGCAGCGACGTGCGCCGTTCCCTTCCCATGCGCGTTTCCGGGCG
ACAGAGCCGCTCGAGCTGGTCCATGCCGACCTCTGCGGGCCGATCACCCC
CAGCACACCAGGAGGCAAGCGCTACTTCATGCTTATAGTCGACGACCACA
GTCACTACATGTGGGCCAAGATGCTACCGGCGAAGGATCACGCCGCGGCC
AGCATCAGACAGTTCGTCGCCACGGCAGAAGCAAAGCGCGGAACAAAACT
GCGCACGTTCAGAACGGACCGGGGCGGTGAGTTCACCTCCACAGCACTCA
GTGAGTACTTCGCGGACCAGGGAGTCCAGCGGCACCTGACGGCGCCTTAC
TCGCCGCAGCAGAACGGCGTCGTGGAGCGGCGCAACCAGACGGTCGTCGG
CATGGCCAGGAGCATGCTCAAGGCAAAGAACATGCCGAGCTGGTTCTGGG
GGGAGGCCGTGGCGACTGCAGTGTTCATCCTCAACAGATCATACACCCGC
AGCGTCGATGGCAAGACCCCCTACGAGGTGTGGCACGGCAAGAAGCCAGC
TGTACACTACCTACGCGTCTTCGGCTGCATCGCCTACGTCAAGAACACGC
GGCCCGGGCTGAAGAAGCTCGACGACCGCAGCACGAAGATGGTCTTCATC
GGCTACGAGGAGGGCTCCAAGGCGTACCGGGTATACGATCCCCTAACCAA
GCGCGTCTATGCGTCGCGAGACGTGGTGTTTGATGAGGCAGCAAGCTGGG
ATTGGAGCGACGGCGGTGAGCTCAACGCCGAGCCGCTCGCTATCCACCAC
GAACTTCCTCCCATCACAAGAGCTCAGAGGATGCCCGACACGGCAGTGGA
GGCGAGCGGCGTGGAGGACACAGGAGCACCAACCGTCACGCCCAAGGCCG
CAGCTAGACCTTCACCATCATCAGCATCACCTCAGACTGCTGTAGCTGTA
ACCACACCGGACACACCCGGCAGGGGTGCGCCCCCGGAAGGCGTTCCGGG
GGGAGTGGAGTTCGTCACTTCGTCGACAGTGCAGCCAGATCTCTTCGACG
CCGACGATGATCCCGTCGCTGGACACCGGTTTCGCTGCATCTCTGACATC
CTCAGGAGGGACAGCGAGCCAGCACAGATGGCCGAACATCTCATGCTAGC
TGAGGAGGAACCACTGAGCTTCGCCGACGCCGAGCCGCACGAGTGCTGGC
GACGCGCCATGCTGGATGAACTGGCCTCAATCAAGGAGAAGAACACTTGG
ACGCTGACTGATCTGCCGGCTGGCCATCAGGCGATCGGGCTCAAGTGGGT
GTACAAGCAGAAGAAAGATGCTGCCGGCGTGGTGATAAAGCACAAGGCGA
GGCTCGTAGCAAGGGGCTTCGTGCAGAAGGAAGGCATCGACTACGACGAT
GCTTTCGCGCCCGTGGTGAGACTGGATTCAGTGCGCGTCATGGTGGGCAT
GGCGGCTCAGCGCGGCTGGGAGCTGGATCATCTCGACGTCAAGTCGGCTT
TCCTCAACGGCGAGCTCAAGAAAGAGGTCTACGTCAAGCAACCACCTAGA
TTTGCTCAGAGAGGAGAGGAACACAAGGTGTACCGCCTACACAAGGCGCT
CTACGGACTGCGGCAAGCTCCACGAGCCTGGAATGCCAAGCTGGACTGTA
CTCTGCAGCAGCTTGGGTTCACGAGCTGCCCATCGGAGCACGCCATGTAT
GCACGAGGAGAGGGACAAGGACGTCTTCTGGTCGGCGTCTACGTCGACGA
TCTTGTCGTCACCGGCGGTGACGCCACGACCATCCACAGGTTCAAGACGA
AGATGATGGGCAAGTTCCGCATGAGTGACCTCGGCCTGCTCAGTTTTTAT
CTGGGCATCGAGGTAAAACAGAAGGCTGGCGAGATCACTCTATCGCAAGC
GGCGTACGCTGATGAGCTCCTGGCACGGGCAGGCATGGCGAACTGCAACC
CGGTGCATGTGCCCATGGAGCCGCGTCTCAAGCTGAGCAAGGAAGGGCCC
GAACCACGGGTGGACGCCACTGCCTATCGTAGCATCATCGAAGGGCTTCG
CTACCTCACCCACACACGGCCGGACATCACCTACGCGGTGGGATACGTGA
GCCGGTTCATGGAGGCGCCGACAACGGCGCATCTCGCCACCGTCAAGCAT
CTGCTACGCTACATATCAGGCACGCGCAAACTTGGTTGCAGGTACGTCAA
GGGTAGGGATGGCGAGCTTGTTGGGTATAGTGATTCGGACATGGCAGGAG
ACATAGACGATCGCAGAAGCACGTCGGGAAGTCTCTTCTTTCTGGGAGGC
GCTCCGATCACTTGGCAGTCCCAGAAGCAGAAGATTGTGGCTCTTTCCTC
GTGCGAAGCAGAGTATGTGGCCGCAACAACGGCGGTCTGCCAGGCGATCT
GGCTGAGCAGGCTCATGAAGGACCTGCTGAAGGAGGATGCCGGCGCCACT
ACCATCTTCATCGACAACAAATCCGCCATCCAGCTGTGCAAGAATCCCGT
CTTCCACGACCGAAGCAAGCATATTGATGTTCGGTTCCACTTCATACGAA
GGTGCATGGAGGAGGGAAGAATCCGAGTCGAACACATCGCCACCGGCGAT
CAACTCGCAGATATTTTCACAAAGTCACTTGGGCGCACGCGGTTTTTGGA
GCTCGCACGCGTATTGGTATGGTAGAGACTTGATCTCACTGTTGTAGCTA
GCTTAGGGGGAGATTGTTAGCAAATAACCTAGCTCGACAGCGTCAGGTTC
AAGGTAGACGCAGTTTCAGGGTTCAGTATCGTCAGTCCCGTAGTGTTCGT
TGTTTTCTGTTAGTTGTTGGTTCAGTCAAGCCTAAGGACGCGGCATGTGC
GCTCCCGAGGCCGTAGTTCACGGCGAGCACGCACCCCTGATCGTGGGATG
GCACGATCCGGTAGAGGGGGTCGTCCTTGATCCATTTTTCCTGTCAATCA
GTGAATAAGAGGAAGAAGAAAAGCAGCAGTTCAGTGCGCTGCACAAAATA
CTGTCGTCTCCCTCTCTCGTTCTCTCATCGCCACTGACAGAAGCTCTCCC
TCTCTCTCGATCGGGGGTAGGGTAGCGACTACA