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Look up Ensembl Data for Traes_6AS_9E38A95CB.1

Developmental timecourse in five tissues

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BLAST Hit	Grain_Z71	Grain_Z75	Grain_Z85	Leaf_Z10	Leaf_Z23	Leaf_Z71	Root_Z10	Root_Z13	Root_Z39	Spike_Z32	Spike_Z39	Spike_Z65	Stem_Z30	Stem_Z32	Stem_Z65
Traes_6AS_9E38A95CB.1	186.36	36.01	150.61	53.35	66.05	50.81	159.47	114.58	113.78	122.64	123.71	97.44	114.78	163.05	47.31
Traes_6AS_9E38A95CB.1 SE	3.1	2.66	10.01	3.96	1.95	0.21	10.25	17.77	1.89	3.43	8	2.41	6.61	2.19	2.44

Zadoks Scale Table

Stage	Wheat growth stage	Zadoks scale	Leaves	Root	Stem	Spike	Grain
Seedling	First leaf through coleoptile	10	x	x
Three leaves	3 leaves unfolded	13		x
Three tillers	Main shoot and 3 tillers	23	x
Spike at 1 cm	Pseudostem erection	30			x
Two nodes	2nd detectable node	32			x	x
Meiosis	Flag leaf ligule and collar visible	39		x		x
Anthesis	1/2 of flowering complete	65			x	x
2 DAA (50°C.days)	Kernel (caryopsis) watery ripe	71	x				x
14 DAA (350°C.days)	Medium Milk	75					x
30 DAA (700°C.days)	Soft dough	85					x

Choulet, F., Alberti, A., Theil, S., Glover, N., Barbe, V., Daron, J., Pingault, L., Sourdille, P., Couloux, A., Paux, E., Leroy, P., Mangenot, S., Guilhot, N., Le Gouis, J., Balfourier, F., Alaux, M., Jamilloux, V., Poulain, J., Durand, C., Bellec, A., Gaspin, C., Safar, J., Dolezel, J., Rogers, J., Vandepoele, K., Aury, J.-M., Mayer, K., Berges, H., Quesneville, H., Wincker, P. and Feuillet, C. (2014)
Structural and functional partitioning of bread wheat chromosome 3B. Science, 345, 1249721.

Zadoks JC, Chang TT, Konzak CF. (1974)
A decimal code for the growth stages of cereals. Weed Research 14: 415-21.

Grain Layers

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BLAST Hit	Endosperm	Inner Pericarp	Outer Pericarp
Traes_6AS_9E38A95CB.1	75.82	81.37	68.49
Traes_6AS_9E38A95CB.1 SE	6	0.85	5.15

Pearce S, Huttly AK, Prosser IM, Li YD, Vaughan SP, Gallova B, Patil A, Coghill JA, Dubcovsky J, Hedden P, Phillips AL. (2015)
Heterologous expression and transcript analysis of gibberellin biosynthetic genes of grasses reveals novel functionality in the GA3ox family. BMC Plant Biology,15: 130.

Grain layer developmental timecourse

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BLAST Hit	10DPA_Whole_Endosperm	20DPA_Whole_Endosperm	20DPA_Starchy_Endosperm	20DPA_Transfer_Cells	20DPA_Aleurone	30DPA_Starchy_Endosperm	30DPA_Aleurone_plus_Endosperm
Traes_6AS_9E38A95CB.1	114.78	40.73	30.91	50.99	80.79	34.1	62.43
Traes_6AS_9E38A95CB.1 SE	7.11	1.72	1.59	2.32	5.37	3.82	11.24

Pfeifer M., Kugler K.G., Sandve S. R., Zhan B. J., Rudi H., Hvidsten T. R., IWGSC, Mayer K. F. and Olsen O. A. (2014)
Genome interplay in the grain transcriptome of hexaploid bread wheat. Science, 345: 1250091

Senescing Leaves timecourse
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BLAST Hit	HD	12DAA	22DAA
Traes_6AS_9E38A95CB.1	28.02	41.4	32.26
Traes_6AS_9E38A95CB.1 SE	2.03	2.66	6.48

Pearce S., Tabbita F., Cantu C., Buffalo V., Avni R., Vazquez-Gross H., Zhao R., Conley C.J., Distelfeld A. and Dubcovsky J., (2014).
Regulation of Zn and Fe transporters by the GPC1 gene during early wheat monocarpic senescence. BMC Plant Biology 14:368.

Photomorphogenesis for DV92 and G3116

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BLAST Hit	DV92_Dark	DV92_Light
Traes_6AS_9E38A95CB.1	89.24	88.16
Traes_6AS_9E38A95CB.1 SE	4.14	2

BLAST Hit	G3116_Dark	G3116_Light
Traes_6AS_9E38A95CB.1	70.23	58.94
Traes_6AS_9E38A95CB.1 SE	1.62	0.19

Fox S.E., Geniza M., Hanumappa M., Naithani S., Sullivan C., Preece J., Tiwari V.K., Elser J., Leonard J. M., Sage A., Gresham C., Kerhornou A., Bolser D., McCarthy F., Kersey P., Lazo G.R. and Jaiswal P. (2015)
De novo transcriptome assembly and analyses of gene expression during photomorphogenesis in diploid wheat Triticum monococcum. PLoS ONE 9:e96855.

Drought and Heat

Expression Data Graph

Expression Data Table
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BLAST Hit	Control	Drought_1hr	Drought_6hr	Heat_1hr	Heat_6hr	Drought_plus_heat_1hr	Drought_plus_heat_6hr
Traes_6AS_9E38A95CB.1	40.57	61.19	83.36	52.96	73.71	84.38	76.66
Traes_6AS_9E38A95CB.1 SE	2.35	3.38	0.97	4.53	2.33	2.18	2.49

Liu Z., Xin M., Qin J., Peng H., Ni Z., Yao Y. and Sun Q. (2015)
Temporal transcriptome profiling reveals expression partitioning of homeologous genes contributing to heat and drought acclimation in wheat (Triticum aestivum L.). BMC Plant Biology 15:153.

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