GrainGenes

GrainGenes SQL Interface

This page allows you to perform raw SQL queries directly. This is the ultimate power query. We don't know of any other Web-accessible databases that open this privilege to their users. It entails some risk but we're confident that it's minimal because we know our users are responsible. But, we hope, not timid. We want this interface to be used. Please click here for full information on how to use it.

Premade Queries:
SQL query:	-- Loci near a specified locus, on any map select distinct locus_1.name as Query, map.name as Map, locus_2.name as Locus, p2.begin as Position, ROUND(ABS(p2.begin-p1.begin),1) as Distance from locus locus_1 inner join maplocus p1 on locus_1.id = p1.locusid and p1.begin is not null and locus_1.name like 'AX-94416332' inner join map on p1.mapid = map.id -- Include only those maps that use cM units. inner join mapdataremark on map.mapdataid = mapdataremark.mapdataid and mapdataremark.type = 'Map_units' and mapdataremark.remark like '%cM%' -- First get the nearby loci on this map: left join maplocus p2 on p1.mapid = p2.mapid and ( ABS(p2.begin - p1.begin) < 10 ) -- Then get the names of these nearby loci: left join locus locus_2 on p2.locusid = locus_2.id where -- Don't list locus_1 if there are no neighbors: locus_2.name is not null order by locus_1.name, map.name, p2.begin
	Schema: Diagrams \| Table definitions

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Showing records 1 through 25 of 688 records

Query	Map	Locus	Position	Distance
AX-94416332	Wheat-Axiom2018-AxC-6A	AX-95149411	81.04	8.7
AX-94416332	Wheat-Axiom2018-AxC-6A	AX-94535711	81.04	8.7
AX-94416332	Wheat-Axiom2018-AxC-6A	AX-94632750	81.82	7.9
AX-94416332	Wheat-Axiom2018-AxC-6A	AX-94443076	81.82	7.9
AX-94416332	Wheat-Axiom2018-AxC-6A	AX-94980563	81.82	7.9
AX-94416332	Wheat-Axiom2018-AxC-6A	AX-94460262	81.82	7.9
AX-94416332	Wheat-Axiom2018-AxC-6A	AX-94426042	81.82	7.9
AX-94416332	Wheat-Axiom2018-AxC-6A	AX-94424031	81.82	7.9
AX-94416332	Wheat-Axiom2018-AxC-6A	AX-94479449	81.82	7.9
AX-94416332	Wheat-Axiom2018-AxC-6A	AX-95091450	81.82	7.9
AX-94416332	Wheat-Axiom2018-AxC-6A	AX-95243312	81.82	7.9
AX-94416332	Wheat-Axiom2018-AxC-6A	AX-95133911	81.82	7.9
AX-94416332	Wheat-Axiom2018-AxC-6A	AX-94952400	81.82	7.9
AX-94416332	Wheat-Axiom2018-AxC-6A	AX-94588720	81.82	7.9
AX-94416332	Wheat-Axiom2018-AxC-6A	AX-94526786	81.82	7.9
AX-94416332	Wheat-Axiom2018-AxC-6A	AX-94739869	81.82	7.9
AX-94416332	Wheat-Axiom2018-AxC-6A	AX-94407175	81.82	7.9
AX-94416332	Wheat-Axiom2018-AxC-6A	AX-94482115	81.82	7.9
AX-94416332	Wheat-Axiom2018-AxC-6A	AX-94792830	81.82	7.9
AX-94416332	Wheat-Axiom2018-AxC-6A	AX-94480177	81.82	7.9
AX-94416332	Wheat-Axiom2018-AxC-6A	AX-94644220	81.82	7.9
AX-94416332	Wheat-Axiom2018-AxC-6A	AX-95010988	81.82	7.9
AX-94416332	Wheat-Axiom2018-AxC-6A	AX-94523591	81.82	7.9
AX-94416332	Wheat-Axiom2018-AxC-6A	AX-94560723	81.82	7.9
AX-94416332	Wheat-Axiom2018-AxC-6A	AX-94629993	81.82	7.9

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GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.