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GrainGenes Journal Report: BMC Genomics

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BMC Genomics
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ReferenceColasuonno P et al. (2017) The carotenoid biosynthetic and catabolic genes in wheat and their association with yellow pigments BMC Genomics 18:122.
ReferenceYang Z et al. (2017) Development of a high-density linkage map and mapping of the three-pistil gene (Pis1) in wheat using GBS markers BMC Genomics 18:567-574.
ReferenceLiu X et al. (2017) QTLs for stomatal and photosynthetic traits related to salinity tolerance in barley. BMC Genomics 18:9.
ReferenceWang Y et al. (2017) Genome-wide characterization of JASMONATE-ZIM DOMAIN transcription repressors in wheat (Triticum aestivum L.). BMC Genomics 18:152.
ReferenceHao M et al. (2017) The abundance of homoeologue transcripts is disrupted by hybridization and is partially restored by genome doubling in synthetic hexaploid wheat. BMC Genomics 18:149.
ReferenceHisano H et al. (2017) Exome QTL-seq maps monogenic locus and QTLs in barley. BMC Genomics 18:125.
ReferenceLin M et al. (2016) Genome-wide association analysis on pre-harvest sprouting resistance and grain color in U.S. winter wheat BMC Genomics 17:794-810.
ReferenceLeplat F et al. (2016) Erratum to: Identification of manganese efficiency candidate genes in winter barley (Hordeum vulgare) using genome wide association mapping. BMC Genomics 17:805.
ReferenceEdae EA et al. (2016) Genotype-by-sequencing facilitates genetic mapping of a stem rust resistance locus in Aegilops umbellulata, a wild relative of cultivated wheat BMC Genomics 17:1039.
ReferenceHisano H et al. (2016) Mitochondrial genome sequences from wild and cultivated barley (Hordeum vulgare). BMC Genomics 17:824.
ReferenceLi H et al. (2015) A high density GBS map of bread wheat and its application for dissecting complex disease resistance traits BMC Genomics 16:216.
ReferenceMaccaferri M et al. (2014) A consensus framework map of durum wheat (Triticum durum Desf.) suitable for linkage disequilibrium analysis and genome-wide association mapping. BMC Genomics 15:873.
ReferenceMarone D et al. (2013) Genetic basis of qualitative and quantitative resistance to powdery mildew in wheat: from consensus regions to candidate genes BMC Genomics 14:562.
ReferenceOliver RE et al. (2011) Model SNP development for complex genomes based on hexaploid oat using high-throughput 454 sequencing technology. BMC Genomics 12:77.
ReferenceChutimanitsakun Y et al. (2011) Construction and application for QTL analysis of a restriction site associated DNA (RAD) linkage map in barley BMC Genomics 12:4.
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
ReferenceCuesta-Marcos A et al. (2010) Genome-wide SNPs and re-sequencing of growth habit and inflorescence genes in barley: implications for association mapping in germplasm arrays varying in size and structure BMC Genomics 11.
ReferenceTinker NA et al. (2009) New DArT markers for oat provide enhanced map coverage and global germplasm characterization BMC Genomics 10.
ReferenceAggarwal R et al. (2009) A BAC-based physical map of the Hessian fly genome anchored to polytene chromosomes. BMC Genomics 10:293.
ReferenceYin C et al. (2009) Generation and analysis of expression sequence tags from haustoria of the wheat stripe rust fungus Puccinia striiformis f. sp. Tritici. BMC Genomics 10:626.
ReferenceMa J et al. (2009) Identification of expressed genes during compatible interaction between stripe rust (Puccinia striiformis) and wheat using a cDNA library. BMC Genomics 10:586.
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
ReferenceBolibok-Bragoszewska H et al. (2009) DArT markers for the rye genome - genetic diversity and mapping BMC Genomics 10:578.
ReferenceSteuernagel B et al. (2009) De novo 454 sequencing of barcoded BAC pools for comprehensive gene survey and genome analysis in the complex genome of barley. BMC Genomics 10:547.
ReferenceGu YQ et al. (2009) A BAC-based physical map of Brachypodium distachyon and its comparative analysis with rice and wheat. BMC Genomics 10:496.
ReferenceJing HC et al. (2009) DArT markers: diversity analyses, genomes comparison, mapping and integration with SSR markers in Triticum monococcum. BMC Genomics 10:458.
ReferenceSalina EA et al. (2009) Isolation and sequence analysis of the wheat B genome subtelomeric DNA. BMC Genomics 10:414.
ReferenceWalia H et al. (2009) Comparing genomic expression patterns across plant species reveals highly diverged transcriptional dynamics in response to salt stress. BMC Genomics 10:398.
ReferenceWang X et al. (2009) cDNA-AFLP analysis reveals differential gene expression in compatible interaction of wheat challenged with Puccinia striiformis f. sp. tritici. BMC Genomics 10:289.
ReferenceSchreiber AW et al. (2009) Comparative transcriptomics in the Triticeae. BMC Genomics 10:285.
ReferenceAprile A et al. (2009) Transcriptional profiling in response to terminal drought stress reveals differential responses along the wheat genome. BMC Genomics 10:279.
ReferenceKawaura K et al. (2009) Assessment of adaptive evolution between wheat and rice as deduced from full-length common wheat cDNA sequence data and expression patterns. BMC Genomics 10:271.
ReferenceCoram TE et al. (2009) Large-scale analysis of antisense transcription in wheat using the Affymetrix GeneChip Wheat Genome Array. BMC Genomics 10:253.
ReferenceBernardo AN et al. (2009) Discovery and mapping of single feature polymorphisms in wheat using Affymetrix arrays. BMC Genomics 10:251.
ReferenceQi PF et al. (2009) The gamma-gliadin multigene family in common wheat (Triticum aestivum) and its closely related species. BMC Genomics 10:168.
ReferenceLazarow K and Lutticke S (2009) An Ac/Ds-mediated gene trap system for functional genomics in barley. BMC Genomics 10:55.
ReferenceSalentijn EM et al. (2009) Tetraploid and hexaploid wheat varieties reveal large differences in expression of alpha-gliadins from homoeologous Gli-2 loci. BMC Genomics 10:48.
ReferenceLuo MC et al. (2009) A high-throughput strategy for screening of bacterial artificial chromosome libraries and anchoring of clones on a genetic map constructed with single nucleotide polymorphisms. BMC Genomics 10:28.
ReferenceLi H et al. (2008) Comparative mapping of quantitative trait loci associated with waterlogging tolerance in barley (Hordeum vulgare L.). BMC Genomics 9:401.
ReferenceHayden MJ et al. (2008) Multiplex-Ready PCR: A new method for multiplexed SSR and SNP genotyping BMC Genomics 9:80.
ReferenceBoutrot F et al. (2008) Genome-wide analysis of the rice and Arabidopsis non-specific lipid transfer protein (nsLtp) gene families and identification of wheat nsLtp genes by EST data mining. BMC Genomics 9:86.
ReferenceSimkova H et al. (2008) A novel resource for genomics of Triticeae: BAC library specific for the short arm of rye (Secale cereale L.) chromosome 1R (1RS). BMC Genomics 9:237.
ReferenceFardet A et al. (2008) Coupling amplified DNA from flow-sorted chromosomes to high-density SNP mapping in barley. BMC Genomics 9:294.
ReferenceHoude M and Oury Diallo A (2008) Identification of genes and pathways associated with aluminum stress and tolerance using transcriptome profiling of wheat near-isogenic lines. BMC Genomics 9:400.
ReferenceQin D et al. (2008) Heat stress-responsive transcriptome analysis in heat susceptible and tolerant wheat (Triticum aestivum L.) by using Wheat Genome Array. BMC Genomics 9:432.
ReferencePoole RL et al. (2008) Analysis of wheat SAGE tags reveals evidence for widespread antisense transcription. BMC Genomics 9:475.
ReferenceSalse J et al. (2008) New insights into the origin of the B genome of hexaploid wheat: Evolutionary relationships at the SPA genomic region with the S genome of the diploid relative Aegilops speltoides. BMC Genomics 9:555.
ReferenceArmstead I et al. (2007) Rice pseudomolecule-anchored cross-species DNA sequence alignments indicate regional genomic variation in expressed sequence conservation. BMC Genomics 8:283.
ReferenceWenzl P et al. (2007) A DArT platform for quantitative bulked segregant analysis. BMC Genomics 8:196.
ReferenceIshikawa G et al. (2007) PCR-based landmark unique gene (PLUG) markers effectively assign homoeologous wheat genes to A, B and D genomes. BMC Genomics 8:135.
ReferenceWalia H et al. (2007) Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise. BMC Genomics 8:87.
Referencevan Herpen TW et al. (2006) Alpha-gliadin genes from the A, B, and D genomes of wheat contain different sets of celiac disease epitopes. BMC Genomics 7:1.
ReferenceWicker T et al. (2006) 454 sequencing put to the test using the complex genome of barley. BMC Genomics 7:275.
ReferenceCrismani W et al. (2006) Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat. BMC Genomics 7:267.
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
ReferenceHoude M et al. (2006) Wheat EST resources for functional genomics of abiotic stress. BMC Genomics 7:149.

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