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GrainGenes Locus Report: Amy1

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Locus
Amy1  [ Marker Report ]
Type
Gene
RFLP
Synonym
SynonymAmy1 (Hordeum)
Chromosome
6H
Chromosome Arm
6HL
Map
Barley-consensus-2003-6H68.1
[ Show all 27 ]
[ Show Nearby Loci ]
Bin
6H-Bin 9
6H_09.1
6H_09.1_k9
In QTL
QAa.ChHa-6H
QAa.HaTR-6H
QDp.HaTR-6H
QEv.HaTR-6H
Map Data
Barley consensus
[ Show all 27 ]
2 Point Data
Xris6/Amy1
Species
Hordeum vulgare
Probe
JR143
Associated Gene
Amy1 (Hordeum)
Candidate Gene
Amy1 (Hordeum)
Gene Class
alpha-Amylase
Reference
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
ReferenceRodriguez M et al. (2006) Integration of retrotransposons-based markers in a linkage map of barley. Molecular Breeding 17:173-184.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
ReferenceMesfin A et al. (2003) Quantitative trait loci for fusarium head blight resistance in barley detected in a two-rowed by six-rowed population Crop Science 43:307-318.
ReferenceChoi DW et al. (2000) Map locations of barley Dhn genes determined by gene-specific PCR Theoretical and Applied Genetics 101:350-354.
Data Source
Blake, Tom05.04.19
Graner, Andreas96.11.14
Langridge, Peter J.
Remark
Number of populations contributing to the placement of Amy1 in the Barley, Consensus 2006 DArT maps = 2
Changed position from 969 for consistency
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Igri x Franka
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Igri x Franka
Possible Orthologs
{alpha-Amy-1}alpha-Amy-A1
[ Show all 22 ]