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GrainGenes Locus Report: Bmag0603

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Locus
Bmag0603  [ Marker Report ]
Type
Microsatellite
Synonym
SynonymBmag603
Chromosome
3H
Map
Barley, B73xCPI-3H46.1
[ Show all 9 ]
[ Show Nearby Loci ]
Bin
3H_06.1_k6
Map Data
Barley, Abiotic QTL Consensus
[ Show all 9 ]
Species
Hordeum spontaneum
Hordeum vulgare
Probe
Bmag0603
Bmag603
Reference
ReferenceVarshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
ReferenceRamsay L et al. (2000) A simple sequence repeat-based linkage map of barley Genetics 156:1997-2005.
Remark
[ Hide all but 1 of 6 ]
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex
Locus in 'Barley, Consensus 2007, SSR' mapped in population(s) : Steptoe x Morex, Lina x H. spontaneum
Insert contains repeat (AG)24
Polymorphic Information Content (PIC) = 0.78
Developing laboratory = SCRI (R. Waugh)
Possible Orthologs
{mag603}Bmag603