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GrainGenes Locus Report: CDO345

[Submit comment/correction] [What is a locus?] A genetic locus is a specific position on a chromosome where a gene or genetic marker is located.

Locus
CDO345  [ Marker Report ]
Type
RFLP
Probe
CDO345
Synonym
SynonymCDO345
Chromosome
3H
Map
Hordeum-Bins-3H106.9
[ Show all 11 ]
[ Show Nearby Loci ]
Bin
3H-Bin 10
3H_10.1_k10
Map Data
Barley, Abiotic QTL Consensus
[ Show all 11 ]
Homology
A83370e-value: 2.1probable MFS transporter PA2210 [imported] - Pseudomonas aeruginosa (strain PAO1)
A83370e-value: 2.4probable MFS transporter PA2210 [imported] - Pseudomonas aeruginosa (strain PAO1)
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
ReferenceMesfin A et al. (2003) Quantitative trait loci for fusarium head blight resistance in barley detected in a two-rowed by six-rowed population Crop Science 43:307-318.
Data Source
Close, Timothy J.
Remark
Number of populations contributing to the placement of CDO345 in the Barley, Consensus 2006 DArT maps = 1
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex
Possible Orthologs
{cdo345}Xcdo345
Xcdo345d

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