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GrainGenes Locus Report: CDO749

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Locus
CDO749  [ Marker Report ]
Type
RFLP
Synonym
SynonymCDO749
Chromosome
2B
5H
Chromosome Arm
5HS
Map
Barley-consensus-2003-5H22.7
[ Show all 17 ]
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Bin
5H-Bin 4
5H_04.1
5H_04.1_k4
In QTL
QPm.PrNu-5H
Map Data
Barley consensus
[ Show all 18 ]
Probe
CDO749
Homology
NARB_SYNP7e-value: 5.1NITRATE REDUCTASE (strain PCC 7942)
AC006550_8e-value: 2e-55(AC006550) Identical to gb precursor protein from Arabidopsis thaliana. ESTs gb|H35836, gb|AA651295 and gb|AA721862 come from this gene.
Reference
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
ReferenceRodriguez M et al. (2006) Integration of retrotransposons-based markers in a linkage map of barley. Molecular Breeding 17:173-184.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source
Blake, Tom05.04.19
Langridge, Peter J.
Remark
Number of populations contributing to the placement of CDO749 in the Barley, Consensus 2006 DArT maps = 2
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Possible Orthologs
{cdo749}CDO749B
[ Show all 12 ]