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GrainGenes Locus Report: EBmac0615

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Locus
EBmac0615  [ Marker Report ]
Type
Microsatellite
Synonym
SynonymEBmac615
Chromosome
2H
Map
[ Hide all but 1 of 8 ]
Barley, B73xCPI-2H71.7
Hordeum-Consensus2005-SNP-2H74.686
Hordeum-Consensus2007-SSR-2H65.09
Hordeum-FxS-FHB-QTL-2H81.9
Hordeum-LiHs-SNP-2H70.53
Hordeum-LxHs-2H56
Hordeum-QTLConsensus-Abiotic-2H74.69
Hordeum-QTLConsensus-Agronomic-2H74.69
[ Show Nearby Loci ]
In QTL
QFhs.umn-2H.2
QHD.umn-2H.1
Map Data
Barley, Abiotic QTL Consensus
[ Show all 8 ]
Species
Hordeum spontaneum
Hordeum vulgare
Probe
EBmac0615
EBmac615
Reference
ReferenceVarshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
ReferenceMesfin A et al. (2003) Quantitative trait loci for fusarium head blight resistance in barley detected in a two-rowed by six-rowed population Crop Science 43:307-318.
ReferenceRamsay L et al. (2000) A simple sequence repeat-based linkage map of barley Genetics 156:1997-2005.
Remark
Locus in 'Barley, Consensus 2007, SSR' mapped in population(s) : Lina x H. spontaneum
Insert contains repeat (TG)5CG(TG)3, (TG)10
Polymorphic Information Content (PIC) = 0.23
Developing laboratory = SCRI (R. Waugh)
Possible Orthologs
{mac615}EBmac615