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GrainGenes Locus Report: HVALAAT

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Locus
HVALAAT  [ Marker Report ]
Type
Microsatellite
Synonym
SynonymHVALAAT
HvALAAT.2
HvALLAT
Chromosome
1H
Chromosome Arm
1HS
Map
Barley, B73xCPI-1H50.9
[ Show all 12 ]
[ Show Nearby Loci ]
In QTL
QHea.pil-1H.3
QHei.pil-1H.1
QLoh.pil-1H.1
Map Data
Barley consensus 2003
[ Show all 12 ]
Species
Hordeum spontaneum
Hordeum vulgare
Probe
HVALAAT
HvALAAT.2
ReferencePillen K et al. (2000) Mapping new EMBL-derived barley microsatellites and their use in differentiating German barley cultivars Theoretical and Applied Genetics 101:652-660.
HvALLAT
Reference
ReferenceVarshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
ReferencePillen K et al. (2000) Mapping new EMBL-derived barley microsatellites and their use in differentiating German barley cultivars Theoretical and Applied Genetics 101:652-660.
ReferenceRamsay L et al. (2000) A simple sequence repeat-based linkage map of barley Genetics 156:1997-2005.
Data Source
Langridge, Peter J.
Remark
Assigned to a barley chromosome by PCR screening of wheat barley addition lines
Number of populations contributing to the placement of HvALAAT in the Barley, Consensus 2006 DArT maps = 1
Locus in 'Barley, Consensus 2007, SSR' mapped in population(s) : Lina x H. spontaneum
Insert contains repeat (CT)10
Developing laboratory = SCRI (R. Waugh)