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GrainGenes Locus Report: HVHVA1

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Locus
HVHVA1  [ Marker Report ]
Type
Microsatellite
Chromosome
1H
Map
Hordeum-Consensus2006-DArT-1H108.7
Hordeum-Consensus2007-SSR-1H102.49
Hordeum-LxHs-1H112
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Map Data
Barley, Consensus 2006, DArT
Barley, Consensus 2007, SSR
Barley, LxHs
Species
Hordeum spontaneum
Hordeum vulgare
Probe
HVHVA1
Reference
ReferenceVarshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
ReferenceRamsay L et al. (2000) A simple sequence repeat-based linkage map of barley Genetics 156:1997-2005.
Remark
Number of populations contributing to the placement of HvHVA1 in the Barley, Consensus 2006 DArT maps = 1
Locus in 'Barley, Consensus 2007, SSR' mapped in population(s) : Lina x H. spontaneum
Insert contains repeat (ACC)5
Polymorphic Information Content (PIC) = 0.34
Developing laboratory = SCRI (R. Waugh)