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GrainGenes Locus Report: HVM40

Locus
HVM40  [ Marker Report ]
Type
Microsatellite
Synonym
Correct nameHVM040
SynonymHVM40
Chromosome
4 (4H)
4H
Chromosome Arm
4HS
Map
Barley-consensus-2003-4H6
[ Show all 25 ]
[ Show Nearby Loci ]
Bin
4H_02.2
In QTL
QAa.HaMo-4H
[ Show all 15 ]
Map Data
Barley consensus 2003
[ Show all 25 ]
Species
Hordeum vulgare
Hordeum vulgare subsp. spontaneum
Probe
HVM40
ReferenceLiu Z-W et al. (1996) Development of simple sequence repeat DNA markers and their integration into a barley linkage map. Theoretical and Applied Genetics 93:869-876.
Reference
ReferenceSzucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140.
[ Show all 7 ]
Data Source
Langridge, Peter J.
Remark
[ Hide all but 1 of 8 ]
Number of populations contributing to the placement of HVM40 in the Barley, Consensus 2006 DArT maps = 5
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = L94 x Vada, Vada x SusPtrit, Steptoe x Morex, Oregon Wolfe Barleys
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : L94 x Vada; Oregon Wolfe Dom x Rec; Vada x SusPtrit; Steptoe x Morex
Locus in 'Barley, Consensus 2007, SSR' mapped in population(s) : L94 x Vada, SusPtrit x Vada, Steptoe x Morex, OWBrecessive x OWBdominant
Insert contains repeat (GA)6(GT)4(GA)7
Polymorphic Information Content (PIC) = 0.58
Developing laboratory = VPISU (MA Saghai Maroof)