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GrainGenes Locus Report: HVM44

Locus
HVM44  [ Marker Report ]
Type
Microsatellite
Synonym
Correct nameHVM044
SynonymHVM44
Chromosome
3H
Map
Hordeum-Consensus2005-SNP-3H49.273
[ Show all 9 ]
[ Show Nearby Loci ]
Map Data
Barley, Abiotic QTL Consensus
[ Show all 9 ]
Species
Hordeum spontaneum
Hordeum vulgare
Probe
HVM44
ReferenceLiu Z-W et al. (1996) Development of simple sequence repeat DNA markers and their integration into a barley linkage map. Theoretical and Applied Genetics 93:869-876.
Reference
ReferenceVarshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
ReferenceLi JZ et al. (2003) Development and genetic mapping of 127 new microsatellite markers in barley Theoretical and Applied Genetics 107:1021-1027.
Remark
Number of populations contributing to the placement of HVM44 in the Barley, Consensus 2006 DArT maps = 1
Locus in 'Barley, Consensus 2007, SSR' mapped in population(s) : Lina x H. spontaneum
Insert contains repeat (GA)8
Polymorphic Information Content (PIC) = 0.18
Developing laboratory = VPISU (MA Saghai Maroof)