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GrainGenes Locus Report: HvLOX

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Locus
HvLOX  [ Marker Report ]
Type
Gene
Microsatellite
Synonym
SynonymHvLOX
Chromosome
5H
6H
Map
Barley, B73xCPI-6H50.5
[ Show all 13 ]
[ Show Nearby Loci ]
Map Data
Barley, Abiotic QTL Consensus
[ Show all 10 ]
Species
Hordeum spontaneum
Hordeum vulgare
Hordeum vulgare subsp. spontaneum
Probe
HvLOX
Reference
ReferenceSato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
ReferenceVarshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
ReferenceRamsay L et al. (2000) A simple sequence repeat-based linkage map of barley Genetics 156:1997-2005.
Remark
Number of populations contributing to the placement of HvLOX in the Barley, Consensus 2006 DArT maps = 1
Locus in 'Barley, Consensus 2007, SSR' mapped in population(s) : Lina x H. spontaneum
Insert contains repeat (AG)9
Polymorphic Information Content (PIC) = 0.48
Developing laboratory = SCRI (R. Waugh)