Query (optional)   in Class  

GrainGenes Locus Report: POPA1_0177

[Submit comment/correction][What is a locus?] A genetic locus is a specific position on a chromosome where a gene or genetic marker is located.

Locus
POPA1_0177  [ Marker Report ]
Type
SNP
Probe
HAR35_15223
i_11_10177
Synonym
Other name11_10177
BOPA1_11_10177
BOPA1_1861-2382
Synonym11_10177
psr161
Chromosome
5H
Chromosome Arm
5HS
Map
Hordeum-OPA-2009-5H51
Hordeum-OPA123-2008-5H51
Hordeum-OPAConsensus-2011-5H42.41
Hordeum-OWB-OPA2008-5H58.35
[ Show Nearby Loci ]
Map Data
Barley, OPA 2009, Consensus
Barley, OPA 2011, Consensus
Barley, OPA123-2008, Consensus
Barley, OWB, OPA2008
Species
Hordeum vulgare
Sequence
HVVMRXALLhA0469K22
Reference
ReferenceComadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392.
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
ReferenceSzucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140.
Data Source
Close, Timothy J.
Remark
Marker name in barley Pilot OPA1 = 1_0177
[ Show all 11 ]

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.