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GrainGenes Locus Report: POPA1_1236

[Submit comment/correction][What is a locus?] A genetic locus is a specific position on a chromosome where a gene or genetic marker is located.

Locus
POPA1_1236  [ Marker Report ]
Type
SNP
Probe
HAR35_18952
i_11_11236
Synonym
Other name11_11236
BOPA1_11_11236
BOPA1_ABC09941-1-1-100
Synonym11_11236
Chromosome
2H
Chromosome Arm
2HL
Map
Barley, 2012 9KSNP 2H107
Hordeum-OPA-2009-2H115.78
Hordeum-OPA123-2008-2H115.78
Hordeum-OPAConsensus-2011-2H127.74
Hordeum-OWB-OPA2008-2H135.832
[ Show Nearby Loci ]
Map Data
Barley, 2012 9KSNP
Barley, OPA 2009, Consensus
Barley, OPA 2011, Consensus
Barley, OPA123-2008, Consensus
Barley, OWB, OPA2008
Species
Hordeum vulgare
Sequence
HVVMRXALLhA0672H11
Reference
ReferenceComadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392.
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
ReferenceSzucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140.
Data Source
Close, Timothy J.
Remark
Marker name in barley Pilot OPA1 = 1_1236
[ Show all 10 ]

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