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GrainGenes Locus Report: POPA2_0378

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Locus
POPA2_0378  [ Marker Report ]
Type
SNP
Chromosome
2H
Map
Hordeum-OWB-OPA2008-2H72.752
[ Show Nearby Loci ]
Map Data
Barley, OPA 2009, Consensus
Barley, OWB, OPA2008
Probe
HAR35_1188
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
ReferenceSzucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140.
Remark
[ Hide all but 1 of 7 ]
Marker name in barley Pilot OPA1 = 2_0378
Most representative HarvEST:Barley Assembly #32 Unigene = 2548
Most representative HarvEST:Barley Assembly #35 Unigene = 1188
HarvEST Unigene 35 Probe Set = Contig3655_at
Unigene 35 Rice Locus = LOC_Os07g36470
Description for best rice BLAST hit to Unigene 35 member = vacuolar ATPase subunit H protein, putative, expressed; E value = 0
BLAST hit in the rice genome = vacuolar ATPase subunit H protein, putative, expressed