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GrainGenes Locus Report: POPA2_0680

[Submit comment/correction][What is a locus?] A genetic locus is a specific position on a chromosome where a gene or genetic marker is located.

Locus
POPA2_0680  [ Marker Report ]
Type
SNP
Probe
HAR35_744
i_11_20680
Synonym
Other name11_20680
BOPA1_11_20680
BOPA1_4098-758
Synonym11_20680
Chromosome
4H
Chromosome Arm
4HS
Map
Barley, 2012 9KSNP 4H26.3
Hordeum-OPA-2009-4H26.19
Hordeum-OPA123-2008-4H26.19
Hordeum-OPAConsensus-2011-4H28.75
Hordeum-OWB-OPA2008-4H32.463
[ Show Nearby Loci ]
Map Data
Barley, 2012 9KSNP
Barley, OPA 2009, Consensus
Barley, OPA 2011, Consensus
Barley, OPA123-2008, Consensus
Barley, OWB, OPA2008
Species
Hordeum vulgare
Sequence
HVVMRXALLhA0140G05
Reference
ReferenceComadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392.
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
ReferenceSzucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140.
Data Source
Close, Timothy J.
Remark
Marker name in barley Pilot OPA1 = 2_0680
[ Show all 11 ]

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