GrainGenes

GrainGenes Locus Report: POPA3_1524

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Locus	POPA3_1524  [ Marker Report ]
Type	SNP
Probe	HAR35_8308
Synonym	Synonym 12_31524
Chromosome	4H
Chromosome Arm	4HS
Map	Hordeum-OPA-2009-4H 37.12 Hordeum-OPA123-2008-4H 37.12 Hordeum-OPAConsensus-2011-4H 41.55 Hordeum-OWB-OPA2008-4H 37.916
	[ Show Nearby Loci ]
Map Data	Barley, OPA 2009, Consensus Barley, OPA 2011, Consensus Barley, OPA123-2008, Consensus Barley, OWB, OPA2008
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582. Szucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140.
Data Source	Close, Timothy J.
Remark	[ Hide all but 1 of 12 ] Marker name in barley Pilot OPA1 = 3_1524 Marker name in barley OPA1 = 12_31524 Original SNP name = U35_8308_309 Most representative HarvEST:Barley Assembly #32 Unigene = 16601 Most representative HarvEST:Barley Assembly #35 Unigene = 8308 HarvEST Unigene 35 Probe Set = Unigene 35 Rice Locus = LOC_Os03g51920 Description for best rice BLAST hit to Unigene 35 member = peptidase, M50 family, putative, expressed; E value = 1E-134 Marker name in barley Pilot OPA3 = 3_1524 Marker name in barley OPA2 = 12_31524 Description for best rice BLAST hit to Unigene 35 member = protein peptidase, M50 family, putative, expressed; E value = 1E-134 BLAST hit in the rice genome = peptidase, M50 family, putative, expressed

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