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GrainGenes Locus Report: abc174

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Locus
ABC174  [ Marker Report ]
Type
RFLP
Synonym
Synonymabc174
Chromosome
3H
Chromosome Arm
3HL
Map
Barley-Consensus-3H77
[ Show all 19 ]
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Bin
3H-Bin 15
3H_15.1
3H_15.1_k15
In QTL
QHd.DiMo-3H
QS/T.DiMo-3H
Map Data
3B Physical
[ Show all 21 ]
Species
Hordeum vulgare
Probe
ABC174
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
ReferenceVarshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
ReferenceChoi DW et al. (2000) Map locations of barley Dhn genes determined by gene-specific PCR Theoretical and Applied Genetics 101:350-354.
Data Source
Close, Timothy J.
Remark
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Igri x Franka
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Igri x Franka
In the Bowman-BC x Calicuchima-sib maps, this locus was originally assigned to a second linkage group on 3H. The distance between ABG453 and ABG4 is an average of 31.2 in the 3 GrainGenes maps containing these loci, and the linkage groups were combined at a distance of 31.2 cM.
Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs
{abc174}Xabc174-3
[ Show all 6 ]