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GrainGenes Locus Report: bcd808b

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Locus
bcd808b  [ Marker Report ]
Type
RFLP
SNP
Synonym
SynonymBCD808
Chromosome
4A
4H
5H
Map
Barley-consensus-2003-4H14
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[ Show Nearby Loci ]
Bin
4H-Bin 5
4H_05.1_k5
Map Data
Barley consensus 2003
[ Show all 13 ]
Probe
BCD808
Homology
NP_013059.1e-value: 2.9Succinate dehydrogenase (ubiquinone) iron-sulfur protein subunit; Sdh2p [Saccharomyces cerevisiae] MITOCHONDRIAL PRECURSOR (IP) protein precursor - yeast (Saccharomyces cerevisiae) 1.3.99.1) [Saccharomyces cerevisiae]
TBA_WHEATe-value: 9e-50TUBULIN ALPHA CHAIN
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source
Close, Timothy J.
Langridge, Peter J.
Remark
Number of populations contributing to the placement of BCD808b in the Barley, Consensus 2006 DArT maps = 1
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex
Marker placement value = 0.00 cM on map Oat-KxO/2003-24_26_34
Marker is a framework marker on map Oat-KxO/2003-24_26_34
Possible Orthologs
{bcd808}BCD808
[ Show all 28 ]