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GrainGenes Locus Report: cdo400

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Locus
CDO400  [ Marker Report ]
Type
RFLP
Synonym
Synonymcdo400
Chromosome
1A
1H
5H
7 (5H)
Chromosome Arm
1AL
Map
Hordeum-Bins-1H152.7
[ Show all 15 ]
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Bin
1H-Bin 14
In QTL
QGwe.TaER-5H.2
Map Data
Barley, Abiotic QTL Consensus
[ Show all 16 ]
Probe
CDO400
Homology
BAB05976.1e-value: 1.1(AP001514) BH2257~unknown conserved protein in B. subtilis [Bacillus halodurans]
NP_113448.1e-value: 7e-04ubiquitin-conjugating enzyme E2-21 KD [Guillardia theta]
Reference
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Remark
Number of populations contributing to the placement of CDO400 in the Barley, Consensus 2006 DArT maps = 1
Marker placement value = 0.00 cM on map Oat-KxO/2003-14
Marker is a framework marker on map Oat-KxO/2003-14
Possible Orthologs
{cdo400}CDO400a
[ Show all 8 ]