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GrainGenes Locus Report: scssr02236

[Submit comment/correction][What is a locus?] A genetic locus is a specific position on a chromosome where a gene or genetic marker is located.

Locus
scssr02236  [ Marker Report ]
Type
Microsatellite
SNP
Probe
ABC02236_L01R01
scssr02236
Synonym
Other nameCtig4370
SynonymABC02236_L01R01
Chromosome
2H
Map
Hordeum-Consensus2005-SNP-2H62.384
[ Show all 8 ]
[ Show Nearby Loci ]
Bin
2H_07.2
Map Data
[ Hide all but 1 of 8 ]
Barley, Abiotic QTL Consensus
Barley, Agronomic QTL Consensus
Barley, Consensus 2005, SNP
Barley, Consensus 2007, SSR
Barley, Integrated, Marcel 2009
Barley, OWB, 2005
Barley, OWB, OPA2008
Barley, OWB, SNP
Species
Hordeum vulgare
Reference
ReferenceSzucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140.
ReferenceVarshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
ReferenceRamsay L et al. (2004) Variation shown by molecular markers in barley: genomic and genetic contraints Aspects of Applied Biology 72:146-154.
Data Source
Russell, Joanne
Remark
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Oregon Wolfe Barleys
Locus in 'Barley, Consensus 2007, SSR' mapped in population(s) : OWBrecessive x OWBdominant
Insert contains repeat (GT)13
Developing laboratory = SCRI (R. Waugh)

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