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GrainGenes Locus Report: scssr09041

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Locus
scssr09041  [ Marker Report ]
Type
Microsatellite
SNP
Synonym
Other nameCtig7646
SynonymABC09041_L01R01
Chromosome
5H
Map
Barley, B73xCPI-5H172.4
[ Show all 9 ]
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Bin
5H_15.3
Map Data
Barley, Abiotic QTL Consensus
[ Show all 9 ]
Species
Hordeum vulgare
Probe
ABC09041_L01R01
ABC9041
scssr09041
Reference
ReferenceVarshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
ReferenceRamsay L et al. (2004) Variation shown by molecular markers in barley: genomic and genetic contraints Aspects of Applied Biology 72:146-154.
Data Source
Russell, Joanne
Remark
[ Hide all but 1 of 6 ]
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = L94 x Vada
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : L94 x Vada; Oregon Wolfe Dom x Rec
Locus in 'Barley, Consensus 2007, SSR' mapped in population(s) : L94 x Vada, OWBrecessive x OWBdominant
Insert contains repeat (CATA)12
Developing laboratory = SCRI (R. Waugh)