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GrainGenes Map Data Report: Barley, AxHs/QTL

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Map Data
Barley, AxHs/QTL
Map
Hordeum-Pillen-1H
[ Show all 6 ]
Species
Hordeum vulgare
Parent
Apex (barley)
ISR101-23 (barley)
Type
Genetic
Map Units
cM, Kosambi
Reference
ReferencePillen K et al. (2003) Advanced backcross QTL analysis in barley (Hordeum vulgare L.) Theoretical and Applied Genetics 107:340-352.
Contact
Pillen, Klaus
Remarks
This is the first described advanced-backcross QTL using spring barley as a model, and is the first barley QTL study based exclusively on SSR markers. The mapping population was created from a cross between Hordeum vulgare (Apex) and Hordeum spontaneum (ISR-101-23) followed by 2 cycles of backcrossing with Apex and one cycle of selfing. 136 randomly chosen individuals were used for genotyping and these were subsequently bulk propagated for field testing; BC2F2:5 in 1999, and BC2F2:6 in 2000.
13 quantitative traits were measured in up to 6 environments (3 sites over 2 years), resulting in 86 putative QTLs among 585 marker x trait combinations.
SSR markers polymorphic between the parents but failing to show the ISR101-23 allele in the BC2F2 population are assigned an 'Error 1' to their map position resulting in placement on the map in a column to the right of markers with both alleles found in the BC2F2 population. QTLs are in the right-most column on the interactive maps.
Data Curator
Carollo, Victoria6.03
Trait Study
Above ground biomass, Pillen03
[ Show all 13 ]
QTL
QHea.pil-1H.1
[ Show all 86 ]
Locus
Bmac0029
[ Show all 67 ]