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GrainGenes Map Data Report: Barley, Vada x SusPtrit

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Map Data
Barley, Vada x SusPtrit
Map
Hv-Vada/SusPtrit-1H
[ Show all 7 ]
Species
Hordeum vulgare
Female Parent
Vada (barley)
Male Parent
SusPtrit (barley)
Type
Genetic
Map Units
cM (Kosambi)
Reference
ReferenceMarcel TC et al. (2007) A high-density consensus map of barley to compare the distribution of QTLs for partial resistance to Puccinia hordei and of defence gene homologues. Theoretical and Applied Genetics 114:487-500.
Contact
Niks, Rients E.
Jafary, Hossein
Remarks
152 RILs (F8), descended by single-seed descent from the cross of Vada and SusPtrit, were scored for resistance to five heterologous and two homologous (host) species of rust fungi by Jafary et al. (2006). Total genomic DNA from each line was amplified with 28 primer combinations to produce 427 AFLP markers. Additionally, 24 SSR markers, 4 simple PCR markers and two genes were scored on this population. The map was constructed using JoinMap 3.0; a total of 448 markers were assembled into 18 linkage groups at a LOD threshold of 8 that could be united into 7 linkage groups by Jafary et al. (2006). Then, the data set was used in the construction of the high-density consensus map of barley published by Marcel et al (2006).
Submitted to GrainGenes 19 August 2006.
Mapping scores: SusPtrit = A; Vada = B; missing data = U
Locus
Bmac0156BAABBBBBBAABBBAABBAABABAABBBBAABBBAABABABABAABBBBA BBABAAABABAAAABBABBBABBABABBAAABABBBBAABBAAAUUBBBB BUUBABBAABBBUUAAUUUBUUUAABBABAUBABBABBAABAABAAAABB BB
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