Query (optional)   in Class  

GrainGenes Map Data Report: Oat, OxT

[Submit comment/correction]

Map Data
Oat, OxT
Map
Oat-OxT-1
[ Show all 34 ]
Species
Avena sativa
Parent
Ogle (oat)
TAM O-301 (oat)
Type
Genetic
Map Units
cM, Kosambi
Reference
ReferencePortyanko VA et al. (2001) A linkage map of hexaploid oat based on grass anchor DNA clones and its relationship to other oat maps Genome 44:249-265.
Contact
Holland, Jim
Remarks
Mapping population: 136 F7 recombinant inbred lines developed by single seed descent.
Maps constructed with MAPMAKER 3.0. Linkage groups identified using minimum LOD 3.0 and maximum distance 34.7 cM with the 'join haplotypes' option.
Loci were ordered within linkage groups using the 'order' command. Markers with LOD score < 2.0 were only placed in intervals, and are shown on the maps displaced rightward.
In the mapping scores A = Ogle, B = TAM O-301, - = missing or heterozygous.
Data Curator
Carollo, Victoria
Image
[ Hide all but 1 of 34 ]
Oat, OxT 1 (KO22)
Oat, OxT 10 (KO28)
Oat, OxT 11
Oat, OxT 12
Oat, OxT 13
Oat, OxT 14
Oat, OxT 15 (KO23)
Oat, OxT 16 (KO30)
Oat, OxT 17
Oat, OxT 18
Oat, OxT 19
Oat, OxT 2
Oat, OxT 20
Oat, OxT 21
Oat, OxT 22
Oat, OxT 23 (KO14)
Oat, OxT 24
Oat, OxT 25
Oat, OxT 26
Oat, OxT 27
Oat, OxT 28
Oat, OxT 29 (KO4)
Oat, OxT 3 (KO3)
Oat, OxT 30
Oat, OxT 31
Oat, OxT 32 (KO17)
Oat, OxT 33 (KO10)
Oat, OxT 34 (KO11)
Oat, OxT 4 (KO5)
Oat, OxT 5
Oat, OxT 6
Oat, OxT 7 (KO21)
Oat, OxT 8 (KO6)
Oat, OxT 9
Locus
aa02.100BAABBBAABBAAA-ABABAABBBBBAAAA---A-ABBA-BAAABABABBB ABB-BAA--ABBBBB--AABBBAABAAAABABBAABBBABAAAABABB-- AB-----------------BBAAAAAAAAA-BABA-
[ Show all 442 ]

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.