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GrainGenes Map Data Report: Barley, Igri x Franka, SSR

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Map Data
Barley, Igri x Franka, SSR
Map
Hordeum-IxF-SSR-1H
[ Show all 7 ]
Species
Hordeum vulgare
Parent
Igri (barley)
Franka (barley)
Type
Genetic
Map Units
cM
Reference
ReferenceLi JZ et al. (2003) Development and genetic mapping of 127 new microsatellite markers in barley Theoretical and Applied Genetics 107:1021-1027.
Contact
Roeder, Marion S.
Remarks
127 new SSRs from barley were named GBMS for 'Gatersleben Barley MicroSatellite, and mapped on two populations: Igri x Franka (this data set) and Steptoe x Morex (see 'Barley, Steptoe x Morex, SSR'). Confirmation of chromosome assignment was done on wheat (cv. 'Chinese Spring') / barley (cv. 'Betzes') addition lines.
Primer sequences for these SSRs are proprietary and those interested should contact Marion Roeder.
Raw locus data contain additional mapping data for markers from the SCRI which may be useful for the formation of consensus maps. The data were created by Jingzhao Li, Tatyana Sjakste and Martin Ganal.
Mapping scores are for progeny lines 1-16, 18-33, 50-52, 54-60, and 88-118.
In the mapping scores A=Franka, B=Igri.
Data Curator
Carollo, Victoria
Locus
[ Hide all but 1 of 112 ]
ABC156d
ABC161
ABC175
ABC302
ABG358
ABG380
ABG387a
ABG387b
ABG391
ABG4
ABG458
ABG461
ABG472
ABG476
ABG495b
ABG500A
ABG500b
BCD351e
BG123a
Bmac134AA-AB-BAB-AB-BAAAB-BB-BBBABA-AAAAAABAAABAB-ABABAAA ABBABAABAAABBAB-BAABBBA
Bmac213BA-BB-BBA-BA-B---B-AB-ABBBAA-ABBAAAABAAAABBAABBBBA ABBBBBBABBBABBB-BBABBAB
Bmac31AA-BB-BBA-BA-BBAAB-AA-BABBBB-BAAABABAABBBBABBBABAA BBABBBBBBABBBBB-BABAABB
Bmag125AA-AA-AAA-AA-AAAAA-AA-AABBBB-BBBBAABABBABBBBAAABAA BABABBBABAAAAAA-BBAAAAA
Bmag138BB-BB-BBA-AA-AABBA-AB-AAAAAB-AABBBBABABAABBABAAABA AABBAABABABBBAA-BABAAAA
Bmag206AA-AA-ABB-BA-BBBBB-AA-AAABAB-BBBABAAAAAAAAABBBBAAB ABAABBBAAABBAAB-BBBBBBB
Bmag223-B-BA-BBB-BA-BBBBB-BB-BBABAA-BA-ABBBBBABABABBABABB BABBBBAABABABBB-BAAABBB
Bmag382AA-BA-AAA-AA-AAABB-AB-BBBBBA-BABAAAABABBBBBAAAAABA BABBBBBABABBAAA-ABBABBB
Bmag500AB-AA-BBB--B-BBAAA-BB-A--BBA-BBBBAA-BB-ABAAAB-ABBA BBB-ABB-BBBBBBA-BBABAAB
Bmag7AA-AA-ABB-BA-BBBBB-AA-AAA--B-BBBABAAAAAAAAABBBBAAB ABAABBBAAABBAAB-BBBBBBB
BREAK1
BREAK2
Brz
cMWG652a
cMWG706A
cMWG720
cMWG733
EBmac603AB-BB-ABB-AA-AABBA-AA-BAABAA-ABBBBAAAAAAAAAABAAABB BBAABBBAAABBABB-BABABBB
EBmac755AA-BB-BBA-BB-ABBAA-AA-BABBAA-BABBAAAABBBBBABAABBBB ABBBBBAABABABAB-B-AABBB
EBmac906BA-BA-BAB-AA-AABAB-AA-BBABBB-BBAAABAABBBABBBAABBAA ABABBBABABBABAA-BBBBABA
GBMS106AB-BA-BBB-BA-BBABB-BB-BBABAA-BABAABBBBABABABBABABA BABBBBAABAAABBB-BAAABBB
GBMS107BB-BB-BBB-BB-BBAAA-BB-ABBBBA-BAABBBABAAAAAABBBAABB ABBABBAABBBBABA-BAAAABA
GBMS11AA-AA-AAA-AA-AAAAA-AA-AABBBB-BBBBAAAABBAAABBBAAAAA BABABBBABABAAAA-BAAAAAB
GBMS112AA-AA-BBA-AB-ABBAA-AA-BAABAA-AABBAAAABBBBBABBABABB ABBBBBAABABBBAB-BAAABBB
GBMS114BA-BA-AAB-AA-AABBB-AB-BBBABB-BAABBBAABBBABABBABBAA BAABABABABBBBAA-BBAAAAA
GBMS117BB-BB-BBB-BB-BBBBA-BB-BABBAB-BBBBBBBBBBBBBBBBBBABB BBBBBBBABAABBBB-BBBBBAB
GBMS120BA-BB-BBA-BA-ABBAA-AB-BABBBB-BABABABAABBBBABBBABB- BBABBBBBAABBABB-BABAABB
GBMS128aBB-BB-BBA-AA-AABBA-AB-AAAAAB-AABBBBABABAABBA-AAABA AABAAABABABBBAA-B-BAAAA
GBMS128bAA-AB-BAA-BA-BBBAA-AB-BAABAB-BBABBBABAAAAAABBBBBBA BAAABBBBBAAABBB-BBBBABA
GBMS13AB-AA-ABB-BB-AAAAB-BA-BBBBAA-AAAAABBBBAAAAAABBAABA BABBBABABAABABB-BBAABBA
GBMS138BA-BA-ABB-AA-AABBB-BB-AABABB-BBBBBABBABABAAAAAABAA ABBBBABBAABABBA-ABBBBAA
GBMS14AA-BA-BBA-BA-AAABB-A--BBBBAA-ABAAAAABABABBBABBBBBA ABBBBBBAAABAABB-A-AABAB
GBMS140BB-BB-BBB-BB-BBBBA-B--BABBAB-BBBBBBBBBBBBBBBBBBABA BB-BBBB-BAABBBB-BBBBBAB
GBMS141BB-BB-BB---B-ABBAA-AB-B-BBBB-BABAB-BBB-BBBA--BAABA BB-BBBBB-ABB-BB-B-BAABB
GBMS149BB-BB-BBB-BB-BBBAB-BB-BABB-B-BBBBBBBBBBBABBBBBBABB BBBBBBB-BAABBBB-BBBBBAB
GBMS15BA-BA-BAB-AA-AABAB-AA-BBABBB-BBAAABAAB-BABBBAABAAA AAAABBABABBABAA-BBBBABA
GBMS150BA-BA-BAB-AA-AABAB-AA-BBABBB-BBAAABAABBBABBBAABBAA AAABBBA-ABBABAA-BBBBABA
GBMS166BB-BB-BBB-BB-BBBBA-BB-BABBAB-BBBBBBBBBBBBBBBBBBABB BBBBBBBABAABBBB-BBBBBAB
GBMS17AA-BA-BBA-BA-AAABB-AB-BBBBAA-ABBAAAABABBBBBABABBAA BABBBBBAAABBABA-AAAA-AB
GBMS174BB-BB-BAB-BB-BBABA-AB-BBABAB-BABBABBBBABBBBBBABA-A BABBABBAAABABBB-BBBABAB
GBMS187BA-BB-ABA-AB-BAAAA-AB-AABBAA-ABBAAAABAAAAABAAABAAA ABBBBBBABBBBBBB-BBABBAA
GBMS190BA-BA-BAB-BA-AABAB-AB-BBABAB-ABAAABABABBABBBAABAAA AAAABBBBABBABAA-BBBAABA
GBMS200AA-AA-ABB-BB-BBBBB-AA-BBBBAA-ABABAABABAABBAABAABAA ABABBAAAABAAAAB-BAAAABA
GBMS204B--BB-ABB-BB-BABAA-AB-BABBAB-BBBBBBBBBBBABBBBABBAB BAABBBBBBAABBBB-BB-BBAB
GBMS216AA-BB-BAA-AA-BBBAA-AA-BAABAB-BBABBBABAAAAAABBBBBBA BAAABBBBBAAABBB-BBBBABA
GBMS226AA-BB-ABA-AA-AABAA-AA-BABBAA-BAA-BABAAABBA-ABAABAB BBABBBBBAAABBBB-B-BAABB
GBMS233AA--A-AAA-AA-AAAAA-AA-AABBBB-BBBBAABABBAAABBBAAAAA AABABBBABABAAAA-AAAAAAB
GBMS235AA-AB-BAA-AA-AAAAA-BA-BABAAB-ABABAABABBAAABBBAAAAB AABABBBAABABAAB-ABAAAAB
GBMS244AA-AA-AAA-AA-AABBA-AA-BAABBB-BBBBAABABAABBBBAAABAA BABABBBAAABA----------A
GBMS28BB-BA-ABB-BA-ABBBA-BB-BBBBAB-BABBBBBABBBABAABABABA BAABAAABABABABA-BBAAABB
GBMS29BA-BA-BAB-AA-AABAB-AA-BBABBB-BBABABAABABABBBAABBAA ABABBBA-ABBABAA-BBBBABA
GBMS31AA-AB-BAB-AB-BAAAB-BB-BBBABA-AAAAAABAAA-ABAABABAAA ABBABAABAAABBAB-BAABBBA
GBMS33BA-AA-BBB-AB-BBAAA-BB-ABABBA-BAAABBABBAABAAABAABBA BBBAABBABBBBBBA-BBABAAB
GBMS37AA--A--BA--A-AAAAB-AB-BBBBAA-ABBAAAABABABBBABBBBAA AABBBBBAAABAABB-AAAABAB
GBMS38AB--A-BAB-AA-AA-AB-BA-ABAAAB-BBBBBBBABABAAA-BABBAA BBBBBABBABAAAB--AAB-BBB
GBMS45BA-BB-ABB-BB-BABAA-A---ABBAB-BBBBBBBBB-BABBBBABBAB BAABBBBBBAABBBB-BBBBBAB
GBMS49BA-BA-BAB-AA-AA-AB-AA-BBABBB-BBAAABAABBBABBBAABBAA ABABBBABABBABAA-BBBBABA
GBMS50BB-BB-BBB-BB-BBBAB-BB-BABBAB-BBBBBBBBBBBBBBBBB-BB- BBBBBBBABAABBBB-BBBBBAB
GBMS53AA-BB-AAB-AA-ABBBB-AB-BBBBBB-BABBAABBA-BBB-AAAAABA AABBBBB--BBABAB-ABBBABB
GBMS57BB-BB-BBB-BB-BBBBA-BB-BABBAB-BBBBBBBBBBBBBBBBBBABB BBBBB-BABAABBBB-BBBBBAB
GBMS60AA-AB-BBB-BA-BABAA-AA-BBABBA-AABABAABABBBBAABBBBBA AAABABBBAAAABAA-ABBBAAB
GBMS62BA-BB-BBA-AB-BAABA-AB-AABBAA-ABBAAAABAAAABBAABBBAA ABBBBBB--BBABBB-BBABBAB
GBMS63BA-BB-BBA-BA-ABBBA-AB-BABBBB-BABABABAABBBBABBBABAA BBABBBBBAABBBBB-BABAABB
GBMS66AA-AA-BAA-AA-AAAAA-BA-AABAAB-ABABAABABBAAABBBAAAAB AABABBBABBABAAB-AAAAAAB
GBMS68BB-AB-BBB-BA-AAAAB-AA-BBABAA-AAAABABBAABBBAABBBABA BAAA-BBABAABBBA-ABBAABB
GBMS72AB-AA-BBB-AB-BBAAA-BB-ABABBA-BAABBB-BBBABAABBA-BBB BBBAABB-BBBBBBB-BBABAAB
GBMS74BA-BB-ABB-BB-BABAA-AB-BABBAB-BBBBBBBBBBBABBBBABBBB BBABBBBBBAABBBB-BBBBBAB
GBMS75AB-BB-BAB-BB-BBBAB-AB-BBABAB-BAABABBBBAABBBBBABABA BABBABBAAABABBB-BBBABAB
GBMS77AA-AB-BBB-BA-BABAA-A--BBABBA-AABABAABABBBBAA-BBBBA AAABABB-AAAABAA-ABBBAAB
GBMS81BA-BA-BAB-AA-AABAB-AA-BBABBB-BBAAABAABBBABBBAABBAA ABABBBABABBABAA-BBBBABA
GBMS83BB-BB-BBB-BB-BBAAA-BB-ABBBBA-BAABBBABA-AAAABBBAABB ABBABBA-BBBBABA-BAAAABA
GBMS88AB-B---BA-BB-AB-------BAB----------AA-------B----- ---BB--------BBB-------
GBMS90AA-AB-BAB-AA-BAAAB-BB-BBAABB-AAAAAAAAABBABAABAAAAA AABABBAAAAAAAAB-BAAABBA
GBMS93AA-BA-BBA-BA-AAABB-AB-BBBBAA-ABAAAAABABABBBABBBBBA AABBBBBAAABAABB-A-AABAB
MWG503
MWG522
MWG555b
MWG557
MWG571a
MWG58
MWG584
MWG635a
MWG820
MWG836
MWG837
MWG838
MWG858
MWG877
MWG878
MWG902
MWG934
MWG938
WG622

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