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GrainGenes Map Data Report: Durum wheat, Kofa x UC1113

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Map Data
Durum wheat, Kofa x UC1113
Map
Kofa/UC1113-1A
[ Show all 14 ]
Species
Triticum turgidum ssp. durum
Female Parent
Kofa
Male Parent
UC1113
Type
Genetic
Map Units
cM (Kosambi)
Reference
ReferenceZhang W et al. (2008) QTL analysis of pasta quality using a composite microsatellite and SNP map of durum wheat. Theoretical and Applied Genetics 117:1361-1377.
Contact
Dubcovsky, Jorge
Zhang, Wenjun
Remarks
93 recombinant inbred lines were analyzed for thousand-kernel weight, tests weight, protein content, gluten strength, semolina and pasta color, lipoxygenase activity, pasta firmness, cooking loss and other pasta quality traits in five different environments. UC1113 is a high-yielding line with intermediate pasta quality parameters. Kofa is a high quality durum with excellent color (score 10), very low lipoxygenase activity, high protein and very strong gluten. The map was constructed using Mapmaker version3.0b and QTLs were mapped with QTL Cartographer version2.5. A LOD threshold larger than 2.5 was considered significant.
This map is part of the set of genetic maps constructed by the WheatCAP project (http://maswheat.ucdavis.edu) funded by a USDA-CSREES grant.
Submitted to GrainGenes October 10, 2008.
Mapping scores: UC1113 = 0; Kofa = 1; missing data = 3
QTL
QY.ucw-1B
[ Show all 37 ]
Locus
[ Hide all but 1 of 269 ]
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Xpsr573-4A.111100311131003111133300101311300101300000110111300 111001010000000003000110000100100010011000110
Xpsr573-4A.211100310131003111133300101311300100300000110111300 111001010000000003000110000100101010011000110
Xwg241-1B00100311030113001333301000310301011311110103111301 000100030001001113000111100100133010001111110
Xwg341-5A.203011300130003111033310000300301011300011101111300 000010001103101013110110001310010001113331010
Xwg341-6B.113000311131113101133301111311300111311011100000311 010111011111110013010001101111011111110311110
Xwg983-1A11111300031003100033301101311301111300000100100311 111001100011000103100000001001010111110300010
Xwmc105-6B00001111011003101033311110311310010311101100011310 000101011010110003001111100111110133303333310
Xwmc110-5A00001011100000000110100010101010101100100100000111 000010110101010011001000000110110011101000010
Xwmc116-7A00110101100113101133310111311310011300101000000301 010111013301000133001000000000110310031010110
Xwmc149-5B11110101100110000110100010001003011011011100011110 100011000100010111011001101101110101110100110
Xwmc154-2B00011011000001111011100001111111110000000101111010 011101100001001000110111100101003100010000010
Xwmc160-5B11111001010000011110110000010001110000101011111010 100110010000000101000111111111011101101001110
Xwmc167-2B11110111000113011033301000310310100300110001100311 100010110000011013111001110010011100001011010
Xwmc168-7A00131001001000010100011100001010111000000101100111 000001003111001030100001100111010000030010110
Xwmc179-6A00031110003113111033311000311301011311011000111301 101000113000111033110301101110100001111111010
Xwmc182-7B00110000100001100101100000100110101111011101011110 010110103101010130000311100000011000001111010
Xwmc193-1B33100131131133001033331000310311111331010100100311 010101010001301303103111100100001000010111010
Xwmc195-7B11011101111003101133310110310310110300011013101310 111100101111000003001110011001110101111000010
Xwmc201-6A03000000000333011033301030311301011311010100111301 100000110000111003103001101111100101110111010
Xwmc219-4A11100110101003111133300101311300100300000110111300 111001010000000003000110010100100010011000110
Xwmc24-1A31010100000110100010111301110011000011101100100100 100001011010311101001001101001000111101100010
Xwmc256-6A11001010100113011033301000310311011311000110100301 100000111000011003100001111111100101100110010
Xwmc258-4A11011011101001011111011010101000001000010001011000 310003111131001111111110001111001111101001110
Xwmc262-4A11110110131101011111111101111110101100101011011100 111001011010010001101100000101100100011001010
Xwmc273-7B00111110100133101033311111310301111300101011311311 001010110101011113111111110111010100011010010
Xwmc276-7B00311110100111101011111111110101111000101011111111 001010110101011111111111110111010110011000010
Xwmc28-5B11111011030100111010010001010111110100011001100111 100010010000001101100101111101011101101001010
Xwmc296-2A00111010101003010033301100310311001311010113100300 000010100110111113011000001100101011101101010
Xwmc311-7B00111031111110101101011111000111111000111011111011 010000111111110110013111110101010100011010010
Xwmc312-1A11110101001003100033301101300301111300011000100310 101010110011000103100000001001010111110001010
Xwmc313-4A11100110101001110111000101111000100000000110111100 111001110300000001000110010100101010011000010
Xwmc323-7A11000010100003100133301100310310101311011111111311 100111103300010113011111110110000000010111110
Xwmc329-1A11000000000133311033310001310311000311111000111301 300111011010011103101001101001001101101111110
Xwmc35-2B30001010101003111133311110311311010300101011011300 001101000111001003110111111111110100011000110
Xwmc350-5A03011131000033011133311300300310011300101110100300 011101010130311113111001111110011011100011110
Xwmc361-2B11100111000111011010001000110010100000110001100111 100010110000011011111001110010011100001011310
Xwmc382-2A00100011111000001111010101110110010100101101011101 011100000011110110001000001111101001111111110
Xwmc396-7B00110001111010101010110110100001130003131131011011 010110111010011100111110011000000001111111110
Xwmc398-6B00001111011003101033311110311300010311100100011310 000111011010010003101111100111101110000111110
Xwmc401-2A11111011101133010133311110300300030300000110111301 110010011111111113101000001100111011101110010
Xwmc406-1B00100100000113031033301000310311111311010100100311 010101010001101103300100100100001000010111010
Xwmc428-3A00101110011000011110011100010111111000111100100110 010000011111011011101001100011110100011001010
Xwmc43-3B00001101110030000010000111011010001000101111111100 011000000110000100010110010000000000000000010
Xwmc47-4B10101000101101111110011101010000301111010100100010 010110101101001110000001100010000000300100010
Xwmc476-7B00111100100003101033300101300300100300330101011311 010110100010011103000110000000010000011110110
Xwmc479-7A00101000000000010100011110001010101000110001011111 000001101101001010110111100111100100000011110
Xwmc48-4B00100010000113110033311101311300110300111000011311 001001011010001113100111101101000131100311110
Xwmc488-7A00101000100110010100011010111110011000300010011010 011011101001011110111110010000103010000010010
Xwmc50-3A00000100111131011110011001100111010000010111000010 010000011101001111110001110011100110001001010
Xwmc505-3A00000100111113011133311001300331110300010111000310 010000011101001103110001110011100110001001010
Xwmc524-5A11011001110003000033300000311310101311101100111310 100001100100110113311110001010000311101100010
Xwmc532-3A00100131110111001011011011000101011000011101000011 011030001100111110011111100110111000011011110
Xwmc553-6A01000300000111311001001000011001011111010100111101 100000110000111001110001101113100101110111310
Xwmc577-5A11001001130000000010100000111010101111111100011110 100001100101010011011110001110000011101100010
Xwmc580-6A11100001111110111001100100111100101111010101111011 110001000000010000010111101010101001110111010
Xwmc581-7B00111110100113101033311111310301111300100031011311 001010110103011113111111110111010130011010010
Xwmc596-7A00101000101013110133310100311310111300101010000311 010011101010000113010001110011000110000010310
Xwmc597-2B00101010101003113100100110111111013000003011011000 003101003111001101113111310111330103030000310
Xwmc603-7A00101003101010110100010100111110111000111010003011 310011101010000110013001110011000110000011310
Xwmc606-7A11000010100003100133301100310310101311011111111311 100111103100010133011311110110000000010311110
Xwmc617-4A11010113101000101011111011000110001000011011000110 101001011111000111111111110011101100000001110
Xwmc617-4B01100100010111100010101111000000111111111000111011 101001010010110100100333331111101101111111010
Xwmc621-6B00100003111111100101101111100111111111000100111111 010300111011110000010110001101111111100010110
Xwmc625-3A00101100111111011110110101010111311003110111303113 010100001111011101110001110011130111101001010
Xwmc625-3B00111001011113000001101100011011310113000101303000 000011110011000101010001100110030000000000010
Xwmc626-1B11100101111010101010101000010001111111000100100111 100101030101101101100110000110001003001110010
Xwmc657-4B11101000001133111133300301301301111300310030000331 301111003113001103101130000000101030000010110
Xwmc662-7B00111300100300101001000131000000100000000101011031 010110100010011100000110000003010030013110110
Xwmc716-1A00001000011003000033301001300311101311001000000300 011010110000100103000000000111110110011001110
Xwmc718-4A11100111131110011101011100111010101000010011011000 110101111110111111101110010011001100001001010
Xwmc722-4A11100113101003111133300101311300100300000110111303 111001310000000003000110000100101010011000110
Xwmc727-5A11011001110000000010100000011010101113101100111113 100001100100110111011110001010000011101100010
Xwmc728-1B00100111003110001010001000110101011111110101111101 000100010001001111000111100100310010001131110
Xwmc85-1B30110101111113101033301100310301111311000100100311 100111010101101103100110030010001000001110010
Xwmc89-4B00100010000113110033311101311300110300111000011311 001001011010001113100111101101000101100011110
Xwmc95-1A11000000000113111033310001310311000311111001111301 100111011010011103101001101001001101101111110

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