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GrainGenes Map Data Report: Rye, UC90 x E-line

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Map Data
Rye, UC90 x E-line
Map
Secale-UxE-1
[ Show all 7 ]
Species
Secale cereale
Female Parent
UC90 (rye)
Male Parent
E-line (rye)
Type
Genetic
Map Units
cM (Kosambi)
Reference
ReferenceMa XF et al. (2001) Molecular linkage mapping in rye (Secale cereale L.) Theoretical and Applied Genetics 102:517-523.
Remarks
Mapping population was 110 F3 families from a cross of the dwarf rye UC90 and the Spanish accession E-line, both of which had been inbred more than seven generations. Each family comprised at least 16 F3 plants, bulked to regenerate the F2 genotype.
Maps were constructed from dominant and co-dominant markers using JoinMap version 2.0 with a LOD score of 3.0. Additional markers were included one by one if they did not change the order of the core markers or significantly increase the length of the map.
Total map length 730 cM. The 184 markers include 60 that have been mapped in other rye populations.
Update July 2001 from the previous GrainGenes release 1998, see Reference ITM-97-521.
Locus
[ Hide all but 1 of 191 ]
C1_1RS
Centromere-1R
Centromere-2R
Centromere-3R
Centromere-4R
Centromere-5R
Centromere-6R
Centromere-7R
Xabc160
Xabc160u
Xabc454u
Xabc465
XAdhMapped_with_probep3NTR
Xadpg2rMapped_with_probepSh2.25
Xbcd102
Xbcd1072
Xbcd1086
Xbcd1092
Xbcd110sc
Xbcd111
Xbcd1117e
Xbcd115
Xbcd120
Xbcd1230u
Xbcd1261
Xbcd131.1
Xbcd147a
Xbcd147e
Xbcd1532e1
Xbcd1823A
Xbcd202e
Xbcd207
Xbcd22
Xbcd240
Xbcd265
Xbcd265.1
Xbcd265.2
Xbcd292
Xbcd304
Xbcd304r
Xbcd342u
Xbcd349
Xbcd371
Xbcd385
Xbcd402u
Xbcd442
Xbcd603
Xbcd738
Xbcd808.2
Xbcd828
Xbcd880
Xbcd921
Xbcd98
Xcdo1081
Xcdo118
Xcdo122
Xcdo1328
Xcdo1328b
Xcdo1396sc
Xcdo147c
Xcdo244
Xcdo344u
Xcdo345d
Xcdo36
Xcdo405
Xcdo456
Xcdo545
Xcdo572
Xcdo580
Xcdo59
Xcdo595
Xcdo718
Xcdo78
Xcdo795
Xcdo836
Xcdo99e
XcsIH69
XFbpMapped_with_probePSR39
XHVM40a
XHVM40e
XHVM40g
Xiag111
Xiag115
Xiag220u
Xiag68
Xiag94
Xiag94e
XksuD17
XNorMapped_with_probepScR4.T1
XpepcoMapped_with_probePEPCO
XPgkMapped_with_probeP7
Xpsr104
Xpsr107
Xpsr108
Xpsr1149
Xpsr1149b
Xpsr117
Xpsr1200
Xpsr129
Xpsr129u
Xpsr131
Xpsr131u
Xpsr151
Xpsr158
Xpsr162
Xpsr167bx
Xpsr169
Xpsr303
Xpsr311
Xpsr312
Xpsr371
Xpsr386
Xpsr391
Xpsr426
Xpsr485
Xpsr547
Xpsr547b
Xpsr56
Xpsr596
Xpsr604
Xpsr604u
Xpsr628
Xpsr634
Xpsr662
Xpsr690
Xpsr902
Xpsr903
Xpsr943
Xpsr944s
Xpsr954
Xpsr957
Xpsr958
Xrz14
Xrz261
Xrz538
Xrz698
Xrz87
Xrz995
Xscg1.2
Xscg130u
Xscg143
Xscg143u
Xscg145
Xscg145b
Xscg146
Xscg170
Xscg170e
Xscg173
Xscg184sc
Xscg186
Xscg187
Xscg187u
Xscg202
Xscg202u
Xscg206
Xscg206e
Xscg217
Xscg219u
Xscg222
Xscg223
Xscg23
Xscg24
Xscg244
Xscg25
Xscg26.1
Xscg27
Xscg33
Xscg33.2
Xscg46
Xscg50
Xscg57
Xscg60.2
Xscg75
Xscg78
Xscg78b
Xscg81
Xscg9e1
Xscg9u
XSec3Mapped_with_probepTag1290
Xuah103
Xuah30
Xuah30e
Xuah39a
Xuah48
Xuah52
Xuah61
Xuah6a
Xuah82
Xuah97
Xwg241
Xwms6