Query (optional)   in Class  

GrainGenes Map Data Report: Wheat, Physical, EST

[ Printable Version ]  [ Submit comment/correction ]

Map Data
Wheat, Physical, EST
Map
[ Hide all but 1 of 21 ]
Chinese_Spring_Deletion_1A  [ GBrowser ]
Chinese_Spring_Deletion_1B  [ GBrowser ]
Chinese_Spring_Deletion_1D  [ GBrowser ]
Chinese_Spring_Deletion_2A  [ GBrowser ]
Chinese_Spring_Deletion_2B  [ GBrowser ]
Chinese_Spring_Deletion_2D  [ GBrowser ]
Chinese_Spring_Deletion_3A  [ GBrowser ]
Chinese_Spring_Deletion_3B  [ GBrowser ]
Chinese_Spring_Deletion_3D  [ GBrowser ]
Chinese_Spring_Deletion_4A  [ GBrowser ]
Chinese_Spring_Deletion_4B  [ GBrowser ]
Chinese_Spring_Deletion_4D  [ GBrowser ]
Chinese_Spring_Deletion_5A  [ GBrowser ]
Chinese_Spring_Deletion_5B  [ GBrowser ]
Chinese_Spring_Deletion_5D  [ GBrowser ]
Chinese_Spring_Deletion_6A  [ GBrowser ]
Chinese_Spring_Deletion_6B  [ GBrowser ]
Chinese_Spring_Deletion_6D  [ GBrowser ]
Chinese_Spring_Deletion_7A  [ GBrowser ]
Chinese_Spring_Deletion_7B  [ GBrowser ]
Chinese_Spring_Deletion_7D  [ GBrowser ]
Species
Triticum aestivum
Parent
Chinese Spring
Type
Cytogenetic
Physical
Map Units
Fraction length
URL
http://wheat.pw.usda.gov/NSFProject description and methods
http://wheat.pw.usda.gov/cgi-bin/westsql/map_locus.cgiDetailed mapping data
Contact
[ Hide all but 1 of 14 ]
Anderson, James A.
Anderson, Olin D.
Close, Timothy J.
Dubcovsky, Jorge
Dvorak, Jan
Gill, Bikram S.
Gill, Kulvinder S.
Gustafson, J. Perry
Kianian, Shahryar F.
Lapitan, Nora
Nguyen, Henry T.
Qualset, Calvin O.
Sorrells, Mark E.
Steber, Camille
Remarks
Mapping was performed on a set of 101 aneuploid lines derived from Chinese Spring, each line carrying a terminal deletion of one chromosome arm. The breakpoints of these deletion lines define a set of breakpoint intervals (bins), to which the probes were mapped by differences in Southern hybridization to genomic DNA from each line.
Probes were 6,963 cDNA clones, each representing a different EST unigene. Data of 14 July 2003.
Bins with names ending in '*' are merged intervals due to missing data.
Breakpoint Interval
[ Hide all but 1 of 303 ]
1AS3-0.86-1.00
C-1AS1-0.47
1AL3-0.61-1.00
1AS1-0.47-0.86
C-1AL1-0.17
1AL1-0.17-0.61
1AL1-0.17-1.00*
1AS1-0.17-0.47*
1AS1-0.47-1.00*
C1A
1BS.sat-0.31
C-1BS10-0.50
1BL1-0.47-0.69
1BL2-0.69-0.85
1BL3-0.85-1.00
1BS.sat18-0.50-1.00
1BS.sat19-0.31-0.50
1BS9-0.84-1.06
1BS10-0.50-0.84
C-1BL6-0.32
1BL6-0.32-0.47
1BL1-0.47-0.85*
1BL1-0.47-1.00*
1BL2-0.69-1.00*
1BL6-0.32-0.69*
1BS.sat19-0.31-1.00*
C-1BL1-0.47*
C1B
1DS5-0.70-1.00
1DS1-0.59-0.70
1DS3-0.48-0.59
C-1DS3-0.48
C-1DL4-0.18
1DL4-0.18-0.41
1DL2-0.41-1.00
1DL2-0.18-1.00*
1DL4-0.18-1.00*
1DS3-0.48-0.70*
C-1DL2-0.41*
C-1DS1-0.59*
C1D
C-2AS5-0.78
C-2AL1-0.85
2AL1-0.85-1.00
2AS5-0.78-1.00
C2A
2BS3-0.84-1.00
C-2BS1-0.53
2BL6-0.89-1.00
2BS4-0.75-0.84
2BS1-0.53-0.75
C-2BL2-0.36
2BL2-0.36-0.50
2BL4-0.50-0.89
2BL2-0.36-0.89*
2BL4-0.50-1.00*
2BS1-0.53-0.84*
2BS1-0.53-1.00*
2BS4-0.75-1.00*
2BS4-0.84-1.00*
C-2BL6-0.89*
C-2BS1-0.84*
C-2BS4-0.75*
C-2BS4-0.84*
C2B
2DS5-0.47-1.00
2DS1-0.33-0.47
C-2DS1-0.33
C-2DL3-0.49
2DL3-0.49-0.76
2DL9-0.76-1.00
2DL3-0.49-1.00*
2DS1-0.33-1.00*
C-2DL9-0.76*
C-2DS1-0.47*
C-2DS5-0.47*
C2D
3AS4-0.45-1.00
C-3AL3-0.42
3AL5-0.78-1.00
3AS2-0.23-0.45
C-3AS2-0.23
3AL3-0.42-0.78
3AL3-0.42-1.00*
C-3AL5-0.78*
C-3AS4-0.45*
C3A
C-3BL10-0.50*
C-3BL2-0.22
3BL10-0.50-0.63
3BL7-0.63-1.00
3BS9-0.57-0.78
3BS8-0.78-1.00
3BS1-0.33-0.57
C-3BS1-0.33
3BL2-0.22-0.50
3BL10-0.50-1.00*
3BS1-0.33-0.78*
3BS1-0.33-1.00*
3BS9-0.57-1.00*
C-3BL7-0.63*
C-3BS9-0.57*
C3B
3DS6-0.55-1.00
3DS3-0.24-0.55
C-3DS3-0.24
C-3DL2-0.27
3DL2-0.27-0.81
3DL3-0.81-1.00
3DL2-0.27-1.00*
3DL3-0.27-1.00*
3DS3-0.24-1.00*
C-3DL3-0.81*
C-3DS6-0.55*
C3D
4AL13-0.59-0.66
4AL4-0.80-1.00
4AS3-0.76-1.00
4AS4-0.63-0.76
4AS1-0.20-0.63
C-4AS1-0.20
C-4AL12-0.43
4AL12-0.43-0.59
4AL5-0.66-0.80
4AL11-0.66-0.80*
4AL12-0.43-0.66*
4AL12-0.43-1.00*
4AL13-0.59-1.00*
4AL5-0.66-1.00*
4AS1-0.20-1.00*
4AS4-0.63-1.00*
C-4AL13-0.59*
C4A
4BS4-0.37-0.57
C-4BS4-0.37
4BL5-0.86-1.00
4BS1-0.81-1.00
4BS8-0.57-0.81
C-4BL1-0.71
4BL1-0.71-0.86
4BL1-0.71-1.00*
4BL1-0.86-1.00*
4BL5-0.71-0.86
4BS4-0.37-1.00*
C4B
4DS2-0.82-1.00
4DS3-0.67-0.82
4DS1-0.53-0.67
C-4DS1-0.53
C-4DL9-0.31
4DL9-0.31-0.56
4DL13-0.56-0.71
4DL12-0.71-1.00
4DL13-0.56-1.00*
4DL9-0.31-0.71*
4DL9-0.31-1.00*
4DL9-0.56-0.71*
4DS3-0.67-1.00*
C-4DL13-0.56*
C4D
5AS3-0.75-0.98
5AL23-0.87-1.00
5AS1-0.40-0.75
C-5AS1-0.40
5AS7/10-0.98-1.00
C-5AL12-0.35
5AL12-0.35-0.57
5AL10-0.57-0.78
5AL17-0.78-0.87
5AL10-0.57-0.87*
5AL10-0.57-1.00*
5AL12-0.35-0.78*
5AL12-0.35-0.87*
5AL12-0.35-1.00*
5AL17-0.78-1.00*
5AS1-0.40-0.98*
5AS1-0.40-1.00*
5AS3-0.75-1.00*
C-5AL10-0.57*
C-5AL12-0.57*
C-5AL17-0.78*
C-5AS1-0.75*
C-5AS3-0.75*
C5A
5BS6-0.81-1.00
5BS5-0.71-0.81
5BS8-0.56-0.71
C-5BL6-0.29
5BL14-0.75-0.76
5BL9-0.76-0.79
5BL1-0.55-0.75
5BL16-0.79-1.00
5BS4-0.43-0.56
C-5BS4-0.43
5BL6-0.29-0.55
5BL14-0.75-0.79*
5BL6-0.29-0.75*
5BL9-0.76-1.00*
5BL9/14-0.75-0.79*
5BS4-0.43-0.81*
5BS5-0.71-1.00*
5BS8-0.56-1.00*
C-5BL14-0.75*
C-5BL9-0.76*
C-5BS8-0.56*
C5B
5DS2-0.78-1.00
C-5DL1-0.60
5DL1-0.60-0.74
5DL9-0.74-0.76
5DL5-0.76-1.00
5DS5-0.67-0.78
5DS1-0.63-0.67
C-5DS1-0.63
5DL1-0.60-0.76*
5DL9-0.74-1.00*
5DS5-0.67-1.00*
C-5DL9-0.74*
C-5DS5-0.67*
C5D
C-6AL4-0.55
6AS5-0.65-1.00
6AS1-0.35-0.65
C-6AS1-0.35
6AL4-0.55-0.90
6AL8-0.90-1.00
6AL4-0.55-1.00*
6AS1-0.35-1.00*
C-6AL4-0.90*
C-6AL8-0.90*
C-6AS5-0.65*
C6A
6BS-Sat
6BS5-0.76-1.05
C-6BL3-0.36
C-6BS5-0.76
6BL3-0.36-0.40
6BL5-0.40-1.00
C-6BL5-0.40*
C6B
6DS6-0.99-1.00
6DS4-0.79-0.99
6DS2-0.45-0.79
C-6DS2-0.45
C-6DL6-0.29
6DL6-0.29-0.47
6DL1-0.47-0.68
6DL12-0.68-0.74
6DL11-0.74-0.80
6DL10-0.80-1.00
6DL1-0.47-0.74*
6DL1-0.47-1.00*
6DL11-0.74-1.00*
6DL12-0.68-0.80*
6DL12-0.68-1.00*
6DL6-0.29-0.68*
6DL6-0.29-0.80*
6DL6-0.29-1.00*
6DS4-0.79-1.00*
C-6DS4-0.79*
C6D
7AS1-0.89-1.00
7AS5-0.59-0.89
7AL21-0.74-0.86
7AL18-0.90-1.00
7AS8-0.45-0.59
C-7AS8-0.45
C-7AL1-0.39
7AL1-0.39-0.71
7AL17-0.71-0.74
7AL16-0.86-0.90
7AL1-0.39-1.00*
7AL16-0.86-1.00*
7AL17-0.71-1.00*
7AL21-0.74-0.90*
7AS5-0.59-1.00*
7AS8-0.45-0.89*
7AS8-0.45-1.00*
C-7AS5-0.59*
C7A
7BS1-0.27-1.00
C-7BS1-0.27
7BL10-0.78-1.00
C-7BL2-0.33
7BL2-0.33-0.63
7BL2-0.33-0.78*
7BL7-0.63-0.78
7BL7-0.63-1.00*
C-7BL7-0.63*
C7B
7DS4-0.61-1.00
7DS5-0.36-0.61
C-7DS5-0.36
C-7DL5-0.30
7DL5-0.30-0.61
7DL2-0.61-0.82
7DL3-0.82-1.00
7DL2-0.61-1.00*
7DL5-0.30-0.82*
7DS5-0.36-1.00*
7DS5-0.70-1.00*
C-7DS4-0.61*
C7D