Query (optional)   in Class  

GrainGenes Marker Report: ABA2

[ Printable Version ]  [ Submit comment/correction ]

Locus
ABA2
Type
RFLP
STS
Chromosome
1H
Chromosome Arm
1HL
Map
Barley-Consensus-1H100.9
Barley-Consensus2-1H139.9
Hordeum-StMo-SNP-1H145.78
[ Show Nearby Loci ]
QTL with Locus Marker
QAa.StMo-1H
QMe.StMo-1H.5
Map Data
Barley consensus
Barley consensus 2
Barley, Steptoe x Morex, SNP
Probe
ABA2
Reference
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.



Probe
ABA2
Locus
Xpsr2021(Aba2)-5A
ABA2
ABA002
Type
PCR
STS
PCR primers
GGCAGCAACATGGCATTC
CTGGGGTTGGTTCTGG
Source Species
Hordeum vulgare
Clone Authority
Kleinhofs, Andris
Blake, Tom
Data Source
Kleinhofs, Andris94.01
Blake, Tom95.08.24



Locus for Probe
ABA002
Type
RFLP
Synonym
SynonymABA002
Chromosome
1H
Map
Hordeum-Bins-1H145
[ Show all 6 ]
[ Show Nearby Loci ]
In QTL
QBgnm.StMo-1H.2
Map Data
Barley, Abiotic QTL Consensus
[ Show all 8 ]
Probe
ABA002
ABA2
Reference
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Remark
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex



Locus for Probe
Xpsr2021(Aba2)-5A
Type
RFLP
Chromosome
5A
Chromosome Arm
5AL
Species
Triticum aestivum
Probe
ABA2
ReferenceGulli M et al. (1995) Isolation and characterization of abscisic acid inducible genes in barley seedlings and their responsiveness to environmental stress Life Science Advances-Plant Physiology 14:89-96.
Reference
ReferenceGaliba G et al. (1995) RFLP mapping of the vernalisation (Vrn1) and frost resistance (Fr1) genes on chromosome 5A of wheat. Theoretical and Applied Genetics.
Possible Orthologs
Xpsr2021.1(Aba2)
Xpsr2021.1(Aba2)-5A
Xpsr2021.2(Aba2)
Xpsr2021.2(Aba2)-5B