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GrainGenes Marker Report: ABG313B

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Locus
ABG313B
Type
RFLP
Synonym
SynonymABG313
pAKp3
Chromosome
4 (4H), Steptoe x Morex
4H
Chromosome Arm
4P (4HS), Steptoe x Morex
Map
Barley-Consensus2-4H12.4
[ Show all 14 ]
[ Show Nearby Loci ]
QTL with Locus Marker
QBgnm.StMo-4H
QDp.StMo-4H
QHt.StMo-4H.1
Map Data
Barley consensus 2
[ Show all 14 ]
Species
Hordeum vulgare
Probe
ABG313
pAKp3
Reference
ReferenceVarshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
ReferenceRodriguez M et al. (2006) Integration of retrotransposons-based markers in a linkage map of barley. Molecular Breeding 17:173-184.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source
Blake, Tom05.04.19
Kleinhofs, Andris96.08
Remark
Number of populations contributing to the placement of ABG313B in the Barley, Consensus 2006 DArT maps = 1
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs
ABG313A



Probe for Locus
pAKp3
Locus
ABG312
[ Show all 9 ]
Synonym
Other nameABG313
ASE1
XBA1
Clone Location
Kleinhofs, Andris
Data Source
Kleinhofs, Andris96.08



Probe for Locus
ABG313
Locus
ABG313A
ABG313B
Tel2S
Synonym
Please seepAKp3
General Remarks
Telomere region
Type
Genomic
Linkage Group
2
4
Source Species
Hordeum vulgare
Insert Size
0.2
Clone Vector
pUC
Excision Enzyme
BamHI
EcoRI
Clone Location
GrainGenes Probe Repository
Kleinhofs, Andris
Clone Authority
Kilian, Andrzej
Data Source
Kleinhofs, Andris96.05.08