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GrainGenes Marker Report: ABG356

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Locus
ABG356
Type
RFLP
Synonym
SynonymABG356
Chromosome
2H
Chromosome Arm
2HS
Map
Barley-Consensus-2H0
[ Show all 15 ]
[ Show Nearby Loci ]
Map Data
Barley consensus
[ Show all 17 ]
Species
Hordeum vulgare
Probe
ABG356
Reference
ReferenceSzucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Remark
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Oregon Wolfe Barleys
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Oregon Wolfe Dom x Rec
Possible Orthologs
ABG356-2H
Xabg356-2



Probe
ABG356
Locus
Xabg356-2
ABG356
ABG356-2H
Synonym
SynonymHAR35_38684
External Databases
DDBJ
EMBL
GenBank
Reference
ReferenceKleinhofs A et al. (1993) A molecular, isozyme and morphological map of the barley (Hordeum vulgare) genome Theoretical and Applied Genetics 86:705-712.
Remarks
Shin Ebisu16 gDNA
Type
Genomic
STS
PCR primers
TCA ACT GAG GTA GAA TAC TA
CCA ACA ATA AAG AAT CAA AT
Sequence
L43980
ABG356
Linkage Group
2L
2
Source Species
Hordeum vulgare
Source Germplasm
Shin Ebisu 16
Insert Size
0.7
Clone Vector
pGEM
Excision Enzyme
PstI
Clone Location
GrainGenes Probe Repository
Kleinhofs, Andris
Clone Authority
Blake, Tom
Lapitan, Nora
Data Source
Blake, Tom95.08.24
ATMI92.09
Kleinhofs, Andris96.05.08
Gill, Bikram S.92.09



Locus for Probe
ABG356-2H
Type
STS
Map
Hv-DxR-Stein-2H69.61
Hv-SxM-Stein-2H65.22
[ Show Nearby Loci ]
Map Data
Barley, OWB, Stein2006
Barley, SxM, Stein2006
Probe
ABG356
Possible Orthologs
ABG356
Xabg356-2



Locus for Probe
Xabg356-2
Type
RFLP
Chromosome Arm
2S
Map
Triticeae-Sorrells-2122.2
[ Show Nearby Loci ]
Map Data
Triticeae consensus
Probe
ABG356
Possible Orthologs
ABG356
ABG356-2H