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GrainGenes Marker Report: ABG496

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Locus
ABG496
Type
RFLP
STS
Synonym
SynonymABG496
Chromosome
5H
7 (5H)
Chromosome Arm
5HL
Map
Barley-consensus-2003-5H68.1
[ Show all 26 ]
[ Show Nearby Loci ]
Map Data
Barley consensus
[ Show all 26 ]
Species
Hordeum vulgare
Probe
ABG496
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
[ Show all 7 ]
Data Source
Blake, Tom05.04.19
Close, Timothy J.
Langridge, Peter J.
Remark
Number of populations contributing to the placement of ABG496 in the Barley, Consensus 2006 DArT maps = 1
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Oregon Wolfe Barleys
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Oregon Wolfe Dom x Rec
Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs
ABG496-5H
Xabg496



Probe
ABG496
Locus
ABG496
Xabg496
ABG496-5H
Synonym
SynonymHAR35_4731
Reference
ReferenceKleinhofs A et al. (1993) A molecular, isozyme and morphological map of the barley (Hordeum vulgare) genome Theoretical and Applied Genetics 86:705-712.
Type
Genomic
PCR
Sequence
BH854363
ABG496-5
Source Species
Hordeum vulgare



Locus for Probe
ABG496-5H
Type
STS
Map
Hv-DxR-Stein-5H179.14
Hv-SxM-Stein-5H122.68
[ Show Nearby Loci ]
Map Data
Barley, OWB, Stein2006
Barley, SxM, Stein2006
Probe
ABG496
Possible Orthologs
ABG496
Xabg496



Locus for Probe
Xabg496
Type
RFLP
STS
Map
Tm-Dubcovsky2-2A30.3
[ Show Nearby Loci ]
Map Data
T. monococcum, DV92 x G3116
Probe
ABG496
Possible Orthologs
ABG496
ABG496-5H