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GrainGenes Marker Report: BCD1931

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Locus
bcd1931
Type
RFLP
Map
Oat-KxO/2003-11_41+2063.6
[ Show Nearby Loci ]
Map Data
Oat, KxO, 2003
Probe
BCD1931
Homology
AC016662_16e-value: 7e-24(AC016662) putative protease IV; 48713-44371 [Arabidopsis thaliana]
Remark
Marker placement value = 5.30 cM on map Oat-KxO/2003-11_41+20
Marker is not a framework marker on map Oat-KxO/2003-11_41+20
Possible Orthologs
Xbcd1931
BCD1931



Probe
BCD1931
Locus
Xbcd1931
bcd1931
BCD1931
Synonym
SynonymHAR35_7240
Reference
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
Remarks
Lambda ZAP II library
Type
cDNA
Sequence
BE438938
BCD1931_WHE04E08.s1
Polymorphism
BCD1931 EcoRI
BCD1931 EcoRV
BCD1931 DraI
Source Species
Hordeum vulgare
Source Germplasm
Willis
Source Tissue
etiolated leaf
PCR size
0.9
Clone Vector
pBluSK
Excision Enzyme
EcoRI
Vector PCR primers
M13forward
M13reverse
Vector Amplification
94 C for 78 sec, 50 C 78 sec, 72 C 120 sec, 25 times; 94 C for 78 sec, 50 C 78 sec, 72 C 5 min, 1 time
Antibiotic
Ampicillin
Clone Location
Sorrells, Mark E.
GrainGenes Probe Repository
Clone Authority
Sorrells, Mark E.
Image
BCD1931 KO autoradiogram
Data Source
Sorrells, Mark E.96.07



Locus for Probe
BCD1931
Type
RFLP
Synonym
Other namebcd1931
Map
Oat-2009-KxO_11_41_20_4570
Oat-2016-Consensus-568.9
Oat-2016-KxO_967.9
Oat-2018-Consensus_Mrg0568.9
[ Show Nearby Loci ]
Map Data
Oat-2009-KxO
Oat-2016-Consensus
Oat-2016-KxO
Oat-2018-Consensus
Species
Avena sativa
Probe
BCD1931
Homology
AC016662_16e-value: 7e-24(AC016662) putative protease IV; 48713-44371 [Arabidopsis thaliana]
Possible Orthologs
bcd1931
Xbcd1931



Locus for Probe
Xbcd1931
Type
RFLP
Map
Oat-KxO-2027
Oat-KxO/AFLP-2032
Oat-KxO/Q-2027
[ Show Nearby Loci ]
In QTL
BYDV, KxO-20
[ Show all 7 ]
Map Data
Oat, KxO
Oat, KxO, AFLP
Oat, KxO/QTL
Probe
BCD1931
Homology
AC016662_16e-value: 7e-24(AC016662) putative protease IV; 48713-44371 [Arabidopsis thaliana]
Image
BCD1931 KO autoradiogram
Reference
ReferenceJin H et al. (2000) Combined AFLP and RFLP mapping in two hexaploid oat recombinant inbred populations Genome 94-101.
Possible Orthologs
bcd1931
BCD1931

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