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GrainGenes Marker Report: BCD1939

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Locus
bcd1939
Type
RFLP
Map
Oat-KxO/2003-667.5
[ Show Nearby Loci ]
Map Data
Oat, KxO, 2003
Probe
BCD1939
Homology
AAF56317.1e-value: 0.45(AE003748) CG13626 gene product [Drosophila melanogaster]
Remark
Marker placement value = 1.94 cM on map Oat-KxO/2003-6
Marker is not a framework marker on map Oat-KxO/2003-6
Possible Orthologs
Xbcd1939
BCD1939



Probe
BCD1939
Locus
Xbcd1939
bcd1939
BCD1939
Synonym
SynonymHAR35_18687
Reference
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
Remarks
Lambda ZAP II library
Type
cDNA
Sequence
BE438970
BCD1939_WHE05B02.s1
Polymorphism
BCD1939 DraI
Source Species
Hordeum vulgare
Source Germplasm
Willis
Source Tissue
etiolated leaf
PCR size
1
Clone Vector
pBluSK
Excision Enzyme
EcoRI
Vector PCR primers
M13forward
M13reverse
Vector Amplification
94 C for 78 sec, 50 C 78 sec, 72 C 120 sec, 25 times; 94 C for 78 sec, 50 C 78 sec, 72 C 5 min, 1 time
Antibiotic
Ampicillin
Clone Location
Sorrells, Mark E.
GrainGenes Probe Repository
Clone Authority
Sorrells, Mark E.
Image
BCD1939 KO autoradiogram
Data Source
Sorrells, Mark E.96.07



Locus for Probe
BCD1939
Type
RFLP
Synonym
Other namebcd1939
Map
Oat-2009-KxO_679
Oat-2016-Consensus-1233.4
Oat-2016-KxO_598.5
Oat-2018-Consensus_Mrg1233.4
[ Show Nearby Loci ]
Map Data
Oat-2009-KxO
Oat-2016-Consensus
Oat-2016-KxO
Oat-2018-Consensus
Species
Avena sativa
Probe
BCD1939
Homology
AAF56317.1e-value: 0.45(AE003748) CG13626 gene product [Drosophila melanogaster]
Possible Orthologs
bcd1939
Xbcd1939



Locus for Probe
Xbcd1939
Type
RFLP
Map
Oat-KxO-644.4
[ Show Nearby Loci ]
Map Data
Oat, KxO
Probe
BCD1939
Homology
AAF56317.1e-value: 0.45(AE003748) CG13626 gene product [Drosophila melanogaster]
Image
BCD1939 KO autoradiogram
Possible Orthologs
bcd1939
BCD1939