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GrainGenes Marker Report: Bmac0029

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Locus
Bmac0029
Type
Microsatellite
Synonym
SynonymBmac29
Chromosome
3H
Map
Barley, B73xCPI-3H139.3
[ Show all 8 ]
[ Show Nearby Loci ]
Map Data
Barley, Abiotic QTL Consensus
[ Show all 8 ]
Species
Hordeum spontaneum
Hordeum vulgare
Probe
Bmac0029
Bmac29
Reference
ReferenceVarshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Remark
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Oregon Wolfe Barleys,Igri x Franka
Locus in 'Barley, Consensus 2007, SSR' mapped in population(s) : OWBrecessive x OWBdominant, Igri x Franka, Lina x H. spontaneum
Developing laboratory = SCRI (R. Waugh)
Possible Orthologs
Bmac29



Probe for Locus
Bmac29
Locus
Bmac0029
Bmac29
Synonym
Other nameBmac0029
General Remarks
Further information on the probe is confidential and subject to commercial license
Type
PCR
Source Species
Hordeum vulgare



Probe
Bmac0029
Locus
Bmac0029
Synonym
Other nameBmac29
Reference
ReferenceVarshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
Remarks
Primer sequences for this SSR are proprietary, those interested should contact Robbie Waugh
Type
SSR
Data Source
Waugh, Robbie