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GrainGenes Marker Report: CDO447

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Locus
cdo447
Type
RFLP
Map
Oat-KxO/2003-67.33
[ Show Nearby Loci ]
Map Data
Oat, KxO, 2003
Probe
CDO447
Remark
Marker placement value = 19.60 cM on map Oat-KxO/2003-6
Marker is not a framework marker on map Oat-KxO/2003-6
Possible Orthologs
Xcdo447
[ Show all 6 ]



Probe
CDO447
Locus
Xcdo447-2A
[ Show all 7 ]
Reference
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
Remarks
Uni-ZAP XR library
Type
cDNA
Polymorphism
CDO447 EcoRI
CDO447 EcoRV
Source Species
Avena sativa
Source Germplasm
Brooks CIav9260
Source Tissue
etiolated leaf
PCR size
1.4
Clone Vector
pBluSK
Excision Enzyme
EcoRI
XhoI
Vector PCR primers
M13forward
M13reverse
Vector Amplification
94 C for 60 sec, 50 C 40 sec, 72 C 60 sec, 34 times; 94 C for 60 sec, 50 C 40 sec, 72 C 10 min, 1 time
Antibiotic
Ampicillin
Clone Location
Sorrells, Mark E.
Clone Authority
Sorrells, Mark E.
Image
CDO447 KO autoradiogram
CDO447 SO autoradiogram
Data Source
Sorrells, Mark E.96.07



Locus for Probe
CDO447
Type
RFLP
Synonym
Other namecdo447
Map
Oat-2009-KxO_60
Oat-2016-Consensus-12118.7
Oat-2018-Consensus_Mrg12118.7
[ Show Nearby Loci ]
Map Data
Oat-2009-KxO
Oat-2016-Consensus
Oat-2018-Consensus
Species
Avena sativa
Probe
CDO447
Possible Orthologs
cdo447
[ Show all 6 ]



Locus for Probe
Xcdo447
Type
RFLP
Chromosome
2B
Map
Avena-Sorrells-B5.8
Wheat-Composite2004-2B11
[ Show Nearby Loci ]
Map Data
Diploid Oat, Cornell2
Oat, KxO
Wheat, Composite, 2004
Probe
CDO447
Image
CDO447 KO autoradiogram
Possible Orthologs
cdo447
[ Show all 6 ]



Locus for Probe
Xcdo447-2A
Type
RFLP
Chromosome
2A
Chromosome Arm
2A
2AS
Map
Ta-Synthetic/Opata-2A9.6
Ta-Synthetic/Opata-BARC-2A8.2
Ta-Synthetic/Opata-DR-2A-135.1
Ta-Synthetic/Opata-gbx-2A6.8
Ta-Synthetic/Opata-GPW-2A6.8
[ Show Nearby Loci ]
Map Data
Wheat, Synthetic x Opata  [ GBrowser ]
Wheat, Synthetic x Opata, BARC
Wheat, Synthetic x Opata, DR Genes
Wheat, Synthetic x Opata, gbx RFLP
Wheat, Synthetic x Opata, GPW
Probe
CDO447
Image
CDO447 SO autoradiogram
Possible Orthologs
cdo447
[ Show all 6 ]



Locus for Probe
Xcdo447-2B
Type
RFLP
Chromosome
2B
Chromosome Arm
2BS
Map
Ta-Synthetic/Opata-GPW-2B-43.2
Ta-Synthetic/Opata-SSR-2B9.6
Ta-Synthetic/Opata-SSR2-2B6.9
[ Show Nearby Loci ]
Map Data
Wheat, Synthetic x Opata, GPW
Wheat, Synthetic x Opata, SSR
Wheat, Synthetic x Opata, SSR 2
Probe
CDO447
Possible Orthologs
cdo447
[ Show all 6 ]



Locus for Probe
Xcdo447a
Type
RFLP
Chromosome
2A
Map
Wheat-Composite2004-2A4
[ Show Nearby Loci ]
Map Data
Wheat, Composite, 2004
Probe
CDO447
Possible Orthologs
cdo447
[ Show all 6 ]



Locus for Probe
Xcdo447b
Type
RFLP
Chromosome
2A
Map
Wheat-Composite2004-2A60
[ Show Nearby Loci ]
Map Data
Wheat, Composite, 2004
Probe
CDO447
Possible Orthologs
cdo447
[ Show all 6 ]