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GrainGenes Marker Report: CDO455

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Locus
CDO455
Type
RFLP
Chromosome
3A
3B
3D
Chromosome Arm
3AL
3BL
3DL
Map
Rice-CU-177.1
[ Show Nearby Loci ]
Map Data
Rice, BxOl
Wheat chromosome arm map
Probe
CDO455
Possible Orthologs
CDO455a
CDO455b
Xcdo455
CDO455B
CDO455A



Probe
CDO455
Locus
CDO455b
[ Show all 6 ]
Reference
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
Remarks
Uni-ZAP XR library
OatUni-ZAPXR [c]
Type
cDNA
Sequence
AA231702
AA231871
Polymorphism
CDO455 EcoRI
Linkage Group
3L
Insert Enzyme
EcoRI
XhoI
Source Species
Avena sativa
Source Germplasm
Brooks (oat)
Source Tissue
etiolated leaf
Insert Size
1.2
PCR size
1.2
Clone Vector
pBluSK
Excision Enzyme
EcoRI
XhoI
Vector PCR primers
M13forward
M13reverse
Vector Amplification
94 C for 60 sec, 50 C 40 sec, 72 C 60 sec, 34 times; 94 C for 60 sec, 50 C 40 sec, 72 C 10 min, 1 time
Antibiotic
Ampicillin
Clone Location
Sorrells, Mark E.
Clone Authority
Sorrells, Mark E.
Image
CDO455 BROWS autoradiogram
Data Source
Sorrells, Mark E.96.07
ATMI92.09



Locus for Probe
CDO455a
Type
RFLP
Map
Oat-OxT-153.7
Zea-Ahn-8101.25
[ Show Nearby Loci ]
Map Data
Maize, TxCM
Oat, OxT
Probe
CDO455
Possible Orthologs
CDO455
CDO455b
Xcdo455
CDO455B
CDO455A



Locus for Probe
CDO455b
Type
RFLP
Map
Oat-OxT-3481.6
Zea-Ahn-3166.6
[ Show Nearby Loci ]
Map Data
Maize, TxCM
Oat, OxT
Probe
CDO455
Possible Orthologs
CDO455
CDO455a
Xcdo455
CDO455B
CDO455A



Locus for Probe
CDO455B
Type
RFLP
Synonym
Other namecdo455b
Map
Oat-2016-Consensus-597.1
Oat-2018-Consensus_Mrg0597.1
[ Show Nearby Loci ]
Map Data
Oat-2016-Consensus
Oat-2018-Consensus
Species
Avena sativa
Probe
CDO455
Possible Orthologs
CDO455
CDO455a
CDO455b
Xcdo455
CDO455A



Locus for Probe
CDO455A
Type
RFLP
Map
Oat-2016-Consensus-1783.9
Oat-2018-Consensus_Mrg1783.9
[ Show Nearby Loci ]
Map Data
Oat-2016-Consensus
Oat-2018-Consensus
Species
Avena sativa
Probe
CDO455
Possible Orthologs
CDO455
CDO455a
CDO455b
Xcdo455
CDO455B



Locus for Probe
Xcdo455
Type
RFLP
Map
Avena-Sorrells-G68.6
[ Show Nearby Loci ]
Map Data
Diploid Oat, Cornell2
Probe
CDO455
Possible Orthologs
CDO455
CDO455a
CDO455b
CDO455B
CDO455A

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