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GrainGenes Marker Report: MWG571

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Locus
MWG571
Type
RFLP
Synonym
SynonymMWG571a
MWG571B
MWG571C
Chromosome
3H
Map
Hordeum-Giese2-3H126
[ Show Nearby Loci ]
Map Data
Barley, VGxTP
Probe
MWG571
Possible Orthologs
MWG571a
[ Show all 10 ]



Probe
MWG571
Locus
Xmwg571-3.1
[ Show all 11 ]
Reference
ReferenceGraner A et al. (1991) Construction of an RFLP map of barley Theoretical and Applied Genetics 83:250-256.
Type
Genomic
Sequence
AJ234513
AJ234512
MWG571-5
MWG571-3
Insert Enzyme
PstI
Source Species
Hordeum vulgare
Clone Vector
Bluescript
Excision Enzyme
PstI
Clone Location
GrainGenes Probe Repository
Graner, Andreas
Clone Authority
Graner, Andreas
Data Source
Graner, Andreas94.03.08



Locus for Probe
MWG571a
Type
RFLP
Synonym
SynonymMWG571
Chromosome
3H
Map
Barley-Consensus2-3H70.1
[ Show all 17 ]
[ Show Nearby Loci ]
In QTL
QGms.StMo-3H
Map Data
Barley consensus 2
[ Show all 17 ]
Probe
MWG571
Reference
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
ReferenceRodriguez M et al. (2006) Integration of retrotransposons-based markers in a linkage map of barley. Molecular Breeding 17:173-184.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
ReferenceLi JZ et al. (2003) Development and genetic mapping of 127 new microsatellite markers in barley Theoretical and Applied Genetics 107:1021-1027.
ReferenceMesfin A et al. (2003) Quantitative trait loci for fusarium head blight resistance in barley detected in a two-rowed by six-rowed population Crop Science 43:307-318.
Data Source
Blake, Tom05.04.19
Remark
Number of populations contributing to the placement of MWG571A in the Barley, Consensus 2006 DArT maps = 1
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Igri x Franka
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Igri x Franka
Possible Orthologs
MWG571
[ Show all 10 ]



Locus for Probe
MWG571a-3H
Type
RFLP
Map
Hv-IxF-Stein-3H34.63
Hv-SxM-Stein-3H85.66
[ Show Nearby Loci ]
Map Data
Barley, IxF, Stein2006
Barley, SxM, Stein2006
Probe
MWG571
Possible Orthologs
MWG571
[ Show all 10 ]



Locus for Probe
MWG571B
Type
RFLP
Synonym
SynonymMWG571
Chromosome
3H
Map
Barley-Consensus2-3H47.6
[ Show all 17 ]
[ Show Nearby Loci ]
Map Data
Barley consensus 2
[ Show all 17 ]
Species
Hordeum vulgare
Probe
MWG571
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
[ Show all 6 ]
Data Source
Blake, Tom05.04.19
Close, Timothy J.
Remark
Number of populations contributing to the placement of MWG571B in the Barley, Consensus 2006 DArT maps = 1
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs
MWG571
[ Show all 10 ]



Locus for Probe
MWG571b-3H
Type
RFLP
Map
Hv-SxM-Stein-3H60.62
[ Show Nearby Loci ]
Map Data
Barley, SxM, Stein2006
Probe
MWG571
Possible Orthologs
MWG571
[ Show all 10 ]



Locus for Probe
MWG571C
Type
RFLP
Synonym
SynonymMWG571
Chromosome
3H
Map
Barley-Consensus2-3H0
[ Show all 13 ]
[ Show Nearby Loci ]
Map Data
Barley consensus 2
[ Show all 13 ]
Probe
MWG571
Reference
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
ReferenceRodriguez M et al. (2006) Integration of retrotransposons-based markers in a linkage map of barley. Molecular Breeding 17:173-184.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source
Blake, Tom05.04.19
Remark
Number of populations contributing to the placement of MWG571C in the Barley, Consensus 2006 DArT maps = 1
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Possible Orthologs
MWG571
[ Show all 10 ]



Locus for Probe
MWG571D
Type
RFLP
Chromosome
7H
Map
Barley-Consensus2-7H96.9
Hordeum-Bins-7H85
Hordeum-FxS-FHB-QTL-7H84.5
Hordeum-HxT-base-7H112.4
Hordeum-NABGMP2-7H121.8
[ Show Nearby Loci ]
In QTL
QHd.HaTR-7H
QHD.umn-7H.2
QNb.HaTR-7H
QTw.HaTR-7H.2
QYld.HaTR-7H
Map Data
Barley consensus 2
Barley, BinMap 2005
Barley, FxS, FHB QTL
Barley, HxT
Barley, HxT basemap
Probe
MWG571
Reference
ReferenceMesfin A et al. (2003) Quantitative trait loci for fusarium head blight resistance in barley detected in a two-rowed by six-rowed population Crop Science 43:307-318.
Data Source
Kleinhofs, Andris
Remark
This marker is a Binlocus in the Hordeum-Bins maps, i.e. a marker mapped in other crosses and located to the Steptoe x Morex bin
Possible Orthologs
MWG571
[ Show all 10 ]



Locus for Probe
Xmwg571
Type
RFLP
Map
Tm-Dubcovsky2-3A13.2
[ Show Nearby Loci ]
Map Data
T. monococcum, DV92 x G3116
Probe
MWG571
Possible Orthologs
MWG571
[ Show all 10 ]



Locus for Probe
Xmwg571-3.1
Type
RFLP
Map
Triticeae-Sorrells-3-update28.1
[ Show Nearby Loci ]
Map Data
Triticeae consensus
Probe
MWG571
Possible Orthologs
MWG571
[ Show all 10 ]



Locus for Probe
Xmwg571-3.2
Type
RFLP
Map
Triticeae-Sorrells-3-update54.1
[ Show Nearby Loci ]
Map Data
Triticeae consensus
Probe
MWG571
Possible Orthologs
MWG571
[ Show all 10 ]



Locus for Probe
Xmwg571-3.3
Type
RFLP
Map
Triticeae-Sorrells-3-update66.5
[ Show Nearby Loci ]
Map Data
Triticeae consensus
Probe
MWG571
Possible Orthologs
MWG571
[ Show all 10 ]