Query (optional)   in Class  

GrainGenes Marker Report: POPA2_0083

[ Printable Version ]  [ Submit comment/correction ]

Locus
POPA2_0083
Type
SNP
Synonym
Other name11_20083
BOPA1_11619-618
BOPA1_11_20083
Synonym11_20083
Chromosome
7H
Chromosome Arm
7HL
Map
Barley, 2012 9KSNP 7H77.4
Hordeum-OPA-2009-7H87.97
Hordeum-OPA123-2008-7H87.97
Hordeum-OPAConsensus-2011-7H89.78
Hordeum-OWB-OPA2008-7H90.645
[ Show Nearby Loci ]
Map Data
Barley, 2012 9KSNP
Barley, OPA 2009, Consensus
Barley, OPA 2011, Consensus
Barley, OPA123-2008, Consensus
Barley, OWB, OPA2008
Species
Hordeum vulgare
Probe
HAR35_7010
i_11_20083
Reference
ReferenceComadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392.
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
ReferenceSzucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140.
Data Source
Close, Timothy J.
Remark
Marker name in barley Pilot OPA1 = 2_0083
[ Show all 11 ]



Probe for Locus
HAR35_7010
Locus
POPA2_0083
General Remarks
Probe name is structured 'HAR35_xxxxx' where HAR35 denotes the 35th assembly in the HarvEST project and xxxx is the Unigene number
Type
cDNA
Source Species
Hordeum vulgare
Data Source
Close, Timothy J



Probe
i_11_20083
Locus
POPA2_0083
11_20083
BOPA1_11619-618
BOPA1_11_20083
Reference
ReferenceComadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392.
Type
SNP
Sequence
i_11_20083



Locus for Probe
BOPA1_11619-618
Type
SNP
Synonym
Other name11_20083
BOPA1_11_20083
POPA2_0083
Species
Hordeum vulgare
Probe
i_11_20083
Reference
ReferenceComadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392.



Locus for Probe
BOPA1_11_20083
Type
SNP
Synonym
Other name11_20083
BOPA1_11619-618
POPA2_0083
Map
Barley-Core-2014_7H84.09
[ Show Nearby Loci ]
Map Data
Barley, USDA Core, 2014 Consensus
Species
Hordeum vulgare
Probe
i_11_20083
Reference
ReferenceComadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392.



Locus for Probe
11_20083
Type
SNP
Synonym
Other nameBOPA1_11619-618
BOPA1_11_20083
POPA2_0083
SynonymPOPA2_0083
Species
Hordeum vulgare
Probe
i_11_20083
Reference
ReferenceComadran J et al. (2012) Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley Nature Genetics 44:1388-1392.