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GrainGenes Marker Report: WMC313

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Probe
WMC313
Locus
Xwmc313-4A
[ Show all 6 ]
Reference
ReferenceSomers DJ and Isaac P (2004) SSRs from the Wheat Microsatellite Consortium.
Remarks
Wheat Microsatellite Consortium Project 1, Plate reference 14f2
Donor: Hjortsholm, Sejet
Location from nullisomic/tetrasomic (Daryl Somers, AgCanada, Feb 2001) : 198 bases located on 4A
Trimmed to Rsa1 at both ends. (CA)18 166 to 201.
Type
PCR
SSR
PCR primers
Forward gcAgTcTAATTATcTgcTggcg at 78 length 22 bases, Tm 63
Reverse gggTccTTgTcTAcTcATgTcT at 253 length 22 bases, Tm 59
SSR size
197 bases expected, Chinese Spring
Amplification Conditions
51C anneal, polymorphic product on agarose; 51C anneal, polymorphic on acrylamide (several loci).
Sequence
WMC313
Source Species
Triticum aestivum
Data Source
Somers, Daryl J.2004.06
Isaac, Peter G.2004.06



Locus for Probe
wmc313
Type
Microsatellite
Map
Durum Wheat, NSGC Lr 4A172.3
Wheat, Yr genes and QTL 4A93.5
Wheat-2014-Consensus-Ug99-Update_4A70.68
Wheat_Consensus_2014_Ug99_Rust_4A70.68
[ Show Nearby Loci ]
In QTL
QHd.IDuWUE-4A.4
Map Data
Durum Wheat, NSGC Lr
Wheat, Yr genes and QTL
Wheat-2014-Consensus-Ug99-Update
Wheat_Consensus_2014_Ug99_Rust
Probe
WMC313
Possible Orthologs
Xwmc313
Xwmc313-4A
wmc313-4A



Locus for Probe
Yr60
Chromosome
4A
Chromosome Arm
4AL
Map
Wheat, Yr genes and QTL 4A83.3
[ Show Nearby Loci ]
Map Data
Wheat, Yr genes and QTL
Probe
WMC219
WMC313
WMC776
Associated Gene
Yr60 (Triticum)
Gene Class
Reaction to Puccinia striiformis Westend.
Reference
ReferenceHerrera-Foessel SA et al. (2015) Yr60, a gene conferring moderate resistance to stripe rust in wheat Plant Disease 99:508-511.
ReferenceMAS Wheat. Bringing Genomics to the Wheat Fields. Disease Resistance. Stripe Rust Resistance. Yr60 MAS Wheat. Marker Assisted Selection in Wheat.



Locus for Probe
wmc313-4A
Type
Microsatellite
Map
Wheat_AB, Colosseo x Lloyd 4A_271
[ Show all 6 ]
[ Show Nearby Loci ]
Map Data
Wheat_AB, Colosseo x Lloyd
[ Show all 6 ]
Probe
WMC313
Possible Orthologs
Xwmc313
Xwmc313-4A
wmc313



Locus for Probe
Stb7
Type
Trait
Chromosome
4A
Chromosome Arm
4AL
Map
Wheat-Composite2004-4A140
[ Show Nearby Loci ]
Species
Triticum aestivum
Probe
WMC313
Associated Gene
Stb7 (Triticum)
Gene Class
Reaction to Mycosphaerella graminicola (Fuckel) Schroeter
Reference
ReferenceMcCartney CA et al. (2003) Chromosomal location of a race-specific resistance gene to Mycosphaerella graminicola in the spring wheat ST6 Theoretical and Applied Genetics 107:1181-1186.
Data Source
Soria, Marcelo A.
Remark
Trait marker Xwmc313-4A
Nearby marker on Composite map: Xwmc313
Position on Composite map estimated by GrainGenes.



Locus for Probe
Xwmc313
Type
Microsatellite
Chromosome
4A
Map
Ta-NxW-4A165.6
Wheat-Composite2004-4A140
[ Show Nearby Loci ]
Map Data
Wheat, Composite, 2004
Wheat, Nanda2419 x Wangshuibai
Probe
WMC313
Possible Orthologs
Xwmc313-4A
wmc313
wmc313-4A



Locus for Probe
Xwmc313-4A
Type
Microsatellite
Chromosome
4A
Map
Conan/Reeder-4A181.927
CS/SQ1-4A29.2
Kofa/UC1113-4A129.8
Ta-SSR-2004-4A82.9
[ Show Nearby Loci ]
Map Data
Durum wheat, Kofa x UC1113
Wheat, Chinese Spring x SQ1
Wheat, Conan x Reeder
Wheat, Consensus SSR, 2004
Probe
WMC313
Reference
ReferenceSomers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
Possible Orthologs
Xwmc313
wmc313
wmc313-4A

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