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GrainGenes Marker Report: WMC505

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Locus
wmc505
Type
Microsatellite
Map
Durum Wheat, NSGC Lr 3A52
Durum Wheat, NSGC Lr 3B63.3
Physical-3B56.7
Wheat, Yr genes and QTL 3A27.1
Wheat, Yr genes and QTL 3B37.5
[ Show Nearby Loci ]
Map Data
3B Physical
Durum Wheat, NSGC Lr
Wheat, Yr genes and QTL
Probe
WMC505
Possible Orthologs
Xwmc505-3A
[ Show all 10 ]



Probe
WMC505
Locus
Xwmc505-3A
[ Show all 11 ]
Reference
ReferenceSomers DJ and Isaac P (2004) SSRs from the Wheat Microsatellite Consortium.
Remarks
Wheat Microsatellite Consortium Project 1, Plate reference 20g8
Donor: Byrne, Colorado State
Location from nullisomic/tetrasomic (Daryl Somers, AgCanada, Feb 2001) : 115 bases located on 3A, 133 bases located on 3B, 90 bases located on 3D, 98 bases located on 3B
No trimming done to sequence at Agrogene, ends not located. (CA)31 55 to 116.
Type
PCR
SSR
PCR primers
Forward AggggAggAAAAccTTgTAATc at 28 length 22 bases, Tm 61
Reverse AcgAccTAcgTggTAgTTcTTg at 131 length 22 bases, Tm 60
SSR size
125 bases expected, Chinese Spring
Amplification Conditions
61C anneal, polymorphic on acrylamide (several loci) .
Sequence
WMC505
Source Species
Triticum aestivum
Data Source
Somers, Daryl J.2004.06
Isaac, Peter G.2004.06



Locus for Probe
wmc505-3A
Type
Microsatellite
Map
Wheat_AB, Colosseo x Lloyd 3A_28.6
Wheat_AB, Kofa x UC1113 3A1.3
Wheat_AB, Meridiano x Claudio 3A_223.7
Wheat_AB_2015_Consensus-3A52
[ Show Nearby Loci ]
Map Data
Wheat_AB, Colosseo x Lloyd
Wheat_AB, Kofa x UC1113
Wheat_AB, Meridiano x Claudio
Wheat_AB_2015_Consensus
Probe
WMC505
Possible Orthologs
wmc505
[ Show all 10 ]



Locus for Probe
wmc505-3B
Type
Microsatellite
Map
Wheat_AB, Colosseo x Lloyd 3B59.4
Wheat_AB, Kofa x Svevo 3B_21.5
Wheat_AB_2015_Consensus-3B63.3
[ Show Nearby Loci ]
In QTL
QPrl.UniboDP-3B.2
QTw.KoxSv-3B.2
Map Data
Wheat_AB, Colosseo x Lloyd
Wheat_AB, Kofa x Svevo
Wheat_AB_2015_Consensus
Probe
WMC505
Possible Orthologs
wmc505
[ Show all 10 ]



Locus for Probe
Xwmc505
Type
Microsatellite
Map
Wheat, Avalon x Cadenza 3A60.8
Wheat, Avalon x Cadenza 3B6.6
Wheat, Avalon x Cadenza 3D1
[ Show Nearby Loci ]
Map Data
Wheat, Avalon x Cadenza
Probe
WMC505
Possible Orthologs
wmc505
[ Show all 10 ]



Locus for Probe
Xwmc505-3A
Type
Microsatellite
Chromosome
3A
Map
Conan/Reeder-3A34.7116
Kofa/UC1113-3A29.5
Ta-SSR-2004-3A41.7
[ Show Nearby Loci ]
In QTL
QHt.riso-3A
Map Data
Durum wheat, Kofa x UC1113
Wheat, Conan x Reeder
Wheat, Consensus SSR, 2004
Probe
WMC505
Reference
ReferenceSomers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
Possible Orthologs
wmc505
[ Show all 10 ]



Locus for Probe
Xwmc505-3B
Type
Microsatellite
Chromosome
3B
Map
Ta-SSR-2004-3B57.3
[ Show Nearby Loci ]
Map Data
Wheat, Consensus SSR, 2004
Probe
WMC505
Reference
ReferenceSomers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
Possible Orthologs
wmc505
[ Show all 10 ]



Locus for Probe
Xwmc505-3D
Type
Microsatellite
Chromosome
3D
Map
Ta-SSR-2004-3D31.5
[ Show Nearby Loci ]
Map Data
Wheat, Consensus SSR, 2004
Probe
WMC505
Reference
ReferenceSomers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
Possible Orthologs
wmc505
[ Show all 10 ]



Locus for Probe
Xwmc505.1
Type
Microsatellite
Map
Ta-NxW-3B101
[ Show Nearby Loci ]
Map Data
Wheat, Nanda2419 x Wangshuibai
Probe
WMC505
Possible Orthologs
wmc505
[ Show all 10 ]



Locus for Probe
Xwmc505.2
Type
Microsatellite
Map
Ta-NxW-3A71.3
[ Show Nearby Loci ]
Map Data
Wheat, Nanda2419 x Wangshuibai
Probe
WMC505
Possible Orthologs
wmc505
[ Show all 10 ]



Locus for Probe
Xwmc505a
Type
Microsatellite
Chromosome
3B
Map
Wheat-Composite2004-3B49
[ Show Nearby Loci ]
Map Data
Wheat, Composite, 2004
Probe
WMC505
Possible Orthologs
wmc505
[ Show all 10 ]



Locus for Probe
Xwmc505d
Type
Microsatellite
Chromosome
3D
Map
Wheat-Composite2004-3D56
[ Show Nearby Loci ]
Map Data
Wheat, Composite, 2004
Probe
WMC505
Possible Orthologs
wmc505
[ Show all 10 ]