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GrainGenes Marker Report: WMC522

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Probe
WMC522
Locus
Xwmc522-2A
Xwmc522
wmc522-2A
wmc522
wmc522-3D
Reference
ReferenceSomers DJ and Isaac P (2004) SSRs from the Wheat Microsatellite Consortium.
Remarks
Wheat Microsatellite Consortium Project 1, Plate reference 22h5
Donor: Bright, Zeneca
Location from nullisomic/tetrasomic (Daryl Somers, AgCanada, Feb 2001) : 207 bases located on 2A
Trimmed to insert at both ends. (CT)36 74 to 145, (TC)4 163 to 170.
Type
PCR
SSR
PCR primers
Forward AAAAATcTcAcgAgTcgggc at 5 length 20 bases, Tm 63
Reverse cccgAgcAggAgcTAcAAAT at 178 length 20 bases, Tm 63
SSR size
193 bases expected, Chinese Spring
Amplification Conditions
61C anneal, polymorphic on acrylamide (180-200 bases).
Sequence
WMC522
Source Species
Triticum aestivum
Data Source
Somers, Daryl J.2004.06
Isaac, Peter G.2004.06



Locus for Probe
wmc522-2A
Type
Microsatellite
Chromosome
2A
Map
KPxKC-2A41.1
[ Show all 6 ]
[ Show Nearby Loci ]
In QTL
QHd-eliteDP2014-2A.2
QNdvi.KoxSv-2A
Map Data
Wheat, Klein Proteo x Klein Chaja
[ Show all 6 ]
Probe
WMC522
Possible Orthologs
Xwmc522
Xwmc522-2A
wmc522
wmc522-3D



Locus for Probe
wmc522
Type
Microsatellite
Map
Durum Wheat, NSGC Lr 2A63.6
Wheat, Yr genes and QTL 2A23.2
[ Show Nearby Loci ]
Map Data
Durum Wheat, NSGC Lr
Wheat, Yr genes and QTL
Probe
WMC522
Reference
ReferenceLowe I et al. (2011) Mapping and validation of QTL which confer partial resistance to broadly virulent post-2000 North American races of stripe rust in hexaploid wheat Theoretical and Applied Genetics 123:143-157.
Possible Orthologs
Xwmc522
Xwmc522-2A
wmc522-2A
wmc522-3D



Locus for Probe
wmc522-3D
Type
Microsatellite
Map
Wheat-2014-Consensus-Ug99-Update_3D41.03
[ Show Nearby Loci ]
Map Data
Wheat-2014-Consensus-Ug99-Update
Probe
WMC522
Possible Orthologs
Xwmc522
Xwmc522-2A
wmc522-2A
wmc522



Locus for Probe
Xwmc522
Type
Microsatellite
Chromosome
2A
Map
Wheat, UC1110 x PI610750 2A76.9
Wheat, WH542 x Synthetic 2A77.8
Wheat-Composite2004-2A55
[ Show Nearby Loci ]
Map Data
Wheat, Composite, 2004
Wheat, UC1110 x PI610750
Wheat, WH542 x Synthetic
Probe
WMC522
Reference
ReferenceLowe I et al. (2011) Mapping and validation of QTL which confer partial resistance to broadly virulent post-2000 North American races of stripe rust in hexaploid wheat Theoretical and Applied Genetics 123:143-157.
Possible Orthologs
Xwmc522-2A
wmc522-2A
wmc522
wmc522-3D



Locus for Probe
Xwmc522-2A
Type
Microsatellite
Chromosome
2A
Map
Louise/Penawawa-2A0
Ta-SSR-2004-2A45
USG3209/Jaypee-2A81.3
[ Show Nearby Loci ]
Map Data
Wheat, Consensus SSR, 2004
Wheat, Louise x Penawawa
Wheat, USG3209 x Jaypee
Probe
WMC522
Reference
ReferenceSomers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
Possible Orthologs
Xwmc522
wmc522-2A
wmc522
wmc522-3D

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