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GrainGenes Marker Report: Wx

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Gene
wx
Synonym
Synonymwax (Hordeum)
Gene Class
Starch synthase
Locus
wx



Locus
wx
Type
Gene
RFLP
Synonym
SynonymWx (Secale)
Chromosome
4R
7H
Chromosome Arm
4RL
7HS
Map
Barley-Consensus-7H-61.6
[ Show all 12 ]
[ Show Nearby Loci ]
Map Data
Barley consensus
[ Show all 12 ]
Probe
pcwx27
Wx
Associated Gene
wx
wx (Hordeum)
Wx (Secale)
Candidate Gene
Wx/wx (Hordeum)
Gene Class
Starch synthase
Waxy proteins
Reference
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Remark
Number of populations contributing to the placement of Wx in the Barley, Consensus 2006 DArT maps = 1



Probe for Locus
pcwx27
Locus
Xpsr470(Wx)-4A
[ Show all 7 ]
Synonym
Other nameBGS16
KFP027
Wx
Reference
ReferenceRohde W et al. (1988) Structural analysis of the waxy locus from Hordeum vulgare. Nucleic Acids Research 16:7185-7186.
General Remarks
starch syn, waxy
Type
cDNA
Linkage Group
Barley 1 (7H)
Source Gene Class
Starch synthase
Source Gene
wax (Hordeum)
Wx/wx (Hordeum)
Source Allele
Wax (Hordeum)
wax (Hordeum)
Source Species
Hordeum vulgare
Insert Size
2.397
2.4
Clone Vector
pUC
Excision Enzyme
EcoRI
Clone Location
Kleinhofs, Andris
Clone Authority
Rohde, W.
Data Source
Kleinhofs, Andris96.05.08
Information Source
Referencevon Wettstein-Knowles P (1993) Barley (Hordeum vulgare) 2N = 14. Genetic maps: Locus Maps of Complex Genomes.



Gene Associated with Locus
wx (Hordeum)
Locus
wx



Gene Associated with Locus
Wx (Secale)
Gene Class
Starch synthase
Waxy proteins
Locus
wx
Reference
ReferenceKorzun V et al. (1997) RFLP based mapping of three mutant loci in rye (Secale cereale L.) and their relation to homoeologous loci within the Gramineae. Theoretical and Applied Genetics 95:468-473.



Gene Candidate for Locus
Wx/wx (Hordeum)
Full Name
Low/high (waxy) amylopectin endosperm
Synonym
Synonymwax (Hordeum)
Gene Class
Starch synthase
Candidate Locus
wx
Chromosome
7H
Clone
pcwx27
Info Source
Referencevon Wettstein-Knowles P (1993) Barley (Hordeum vulgare) 2N = 14. Genetic maps: Locus Maps of Complex Genomes.



Probe
Wx
Locus
wx
Synonym
Please seepcwx27
WYE835
Reference
ReferenceRohde W et al. (1987) Isolation of genes that could serve as traps for transposable elements in Hordeum vulgare Barley Genetics V : Proceedings of the Fifth International Barley Genetics Symposium, October 6-11, 1986, Okayama, Japan 533-541.
Source Gene Class
Starch synthase
Data Source
Graner, Andreas94.03.08

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