Query (optional)   in Class  

GrainGenes Marker Report: Xbarc105-4D

[Submit comment/correction]

Locus
Xbarc105-4D
Type
Microsatellite
Map
Chinese_Spring_Deletion_SSR_4D-0.835
[ Show Nearby Loci ]
Breakpoint Interval
4DS3-0.67-1.00*
Map Data
Wheat, Physical, SSR
Probe
BARC105
Possible Orthologs
Xbarc105
Xbarc105-3A
Xbarc105-7A
Xbarc105-7D



Probe for Locus
BARC105
Locus
Xbarc105
Xbarc105-7D
Xbarc105-3A
Xbarc105-4D
Xbarc105-7A
General Remarks
Contains motif : (CAA)27
SSR size is the band size in Chinese Spring
BARC primer pairs are developed by P. Cregan, Q. Song and associates at the USDA-ARS Beltsville Agriculture Research Station. Meiotic map information was developed by J.R. Shi, R. Ward and associates at Michigan State University. Deletion map information was developed by B.Gill, S. Singh and associates at Kansas State University. Funding for this research is provided by USDA-ARS in conjunction with the U.S. Wheat and Barley Scab Initiative.
Type
PCR
SSR
PCR primers
5' CAG GAA GAA AAG GAA AGC ATG CGA CAA 3'
5' GCG GTG TGG CAA TAA TTA CTT TTT 3'
SSR size
139
Amplification Conditions
Annealing temperature = 50
Sequence
BV211487
Source Species
Triticum aestivum
Data Source
Ward, Rick

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.