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GrainGenes Marker Report: Xbarc340-5B

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Locus
Xbarc340-5B
Type
Microsatellite
Chromosome
5B
Map
P91193D1/P92201D5-5B52.1
Ta-Synthetic/Opata-BARC-5B21.2
Wheat, UC1110 x PI610750 5B12.2
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Map Data
Wheat, P91193D1 x P92201D5
Wheat, Synthetic x Opata, BARC
Wheat, UC1110 x PI610750
Probe
BARC340
Reference
ReferenceLowe I et al. (2011) Mapping and validation of QTL which confer partial resistance to broadly virulent post-2000 North American races of stripe rust in hexaploid wheat Theoretical and Applied Genetics 123:143-157.
Possible Orthologs
Xbarc340
[ Show all 16 ]



Probe for Locus
BARC340
Locus
Xbarc340-7B
[ Show all 17 ]
General Remarks
SSR size is the band size in Chinese Spring
BARC primer pairs are developed by P. Cregan, Q. Song and associates at the USDA-ARS Beltsville Agriculture Research Station. Meiotic map information was developed by J.R. Shi, R. Ward and associates at Michigan State University. Deletion map information was developed by B.Gill, S. Singh and associates at Kansas State University. Funding for this research is provided by USDA-ARS in conjunction with the U.S. Wheat and Barley Scab Initiative.
Type
PCR
SSR
PCR primers
5' GCA ACC AAG GCA GCG TAA ATG 3'
5' GCG TGT AGC CGT CCA TAA GCA TCA T 3'
SSR size
221
Amplification Conditions
Annealing temperature = 57
Sequence
BV211809
Source Species
Triticum aestivum
Data Source
Ward, Rick