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GrainGenes Marker Report: XbarcM135-5A

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Locus
XbarcM135-5A
Type
Microsatellite
Map
Chinese_Spring_Deletion_SSR_5A0.175
[ Show Nearby Loci ]
Breakpoint Interval
C-5AL12-0.35
Map Data
Wheat, Physical, SSR
Probe
BARC135
Remark
'M' indicates that this probe is monomorphic in Synthetic, Opata, and Chinese Spring.
Possible Orthologs
Xbarc135
[ Show all 6 ]



Probe for Locus
BARC135
Locus
Xbarc135-4A
[ Show all 8 ]
General Remarks
Contains motif : (CT)19
SSR size is the band size in Chinese Spring
BARC primer pairs are developed by P. Cregan, Q. Song and associates at the USDA-ARS Beltsville Agriculture Research Station. Meiotic map information was developed by J.R. Shi, R. Ward and associates at Michigan State University. Deletion map information was developed by B.Gill, S. Singh and associates at Kansas State University. Funding for this research is provided by USDA-ARS in conjunction with the U.S. Wheat and Barley Scab Initiative.
Type
PCR
SSR
PCR primers
5' ATC GCC ATC TCC TCT ACC A 3'
5' GCG AAC CCA TGT GCT AAG T 3'
SSR size
239
Amplification Conditions
Annealing temperature = 52
Sequence
BV211431
Source Species
Triticum aestivum
Data Source
Ward, Rick

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