Query (optional)   in Class  

GrainGenes Marker Report: Xbcd1355

[ Printable Version ]  [ Submit comment/correction ]

Locus
Xbcd1355
Type
RFLP
Chromosome
5A
Map
Wheat-Composite2004-5A45
[ Show Nearby Loci ]
Map Data
Wheat, Composite, 2004
Probe
BCD1355
Homology
AF287276_2e-value: 1e-35(AF287276) chlorophyll a/b-binding protein precursor [Hordeum vulgare]
AF287276_2e-value: 4e-36(AF287276) chlorophyll a/b-binding protein precursor [Hordeum vulgare]
AF287276_2e-value: 6e-36(AF287276) chlorophyll a/b-binding protein precursor [Hordeum vulgare]
BAB11531.1e-value: 4.6(AB005245) contains similarity to unknown protein~gb|AAF19573.1~gene_id:MUG13.5 [Arabidopsis thaliana]
Possible Orthologs
Xbcd1355-5A
Xbcd1355A
Xbcd1355B
bcd1355



Probe for Locus
BCD1355
Locus
Xbcd1355-5A
Xbcd1355A
Xbcd1355B
Xbcd1355
bcd1355
Synonym
SynonymHAR35_14265
HAR35_33772
Reference
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Lambda ZAP II library
Type
cDNA
Sequence
BE438636
[ Show all 8 ]
Polymorphism
Durums BCD1355 EcoRI
BCD1355 EcoRI
Source Species
Hordeum vulgare
Source Germplasm
Willis
Source Tissue
etiolated leaf
PCR size
0.7
Clone Vector
pBluSK
Excision Enzyme
EcoRI
Vector PCR primers
M13forward
M13reverse
Vector Amplification
94 C for 78 sec, 50 C 78 sec, 72 C 120 sec, 25 times; 94 C for 78 sec, 50 C 78 sec, 72 C 5 min, 1 time
Antibiotic
Ampicillin
Clone Location
Sorrells, Mark E.
GrainGenes Probe Repository
Clone Authority
Sorrells, Mark E.
Image
BCD1355 SO autoradiogram
Data Source
Sorrells, Mark E.96.07